Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01114 ATGGCCTCTTGCGACGACGACGACGAGTTCTCTCTCCTCCGTGACGATAACCACCACCTCCACCAACCCTACGCGCCGCACCACCACTTCTCCCCCTCCGCCGTCGCCGTCGCCCCTGTCCCACCCAAACCCGTCGCTGACGACGAGGACTACGGAAACCCCTTCGACGACGACGGCAGCGAGAAGCGCAAGGACCGCGAGGAGATCAGCGAGGGAGCCGCGTCGTACGGATTCAATAAGAGATCTAAGGCTCCGCCGTCGAGCGCAGGCAGCGCCGAGTACCGGAAGGACAGGGAGGAGTGGAGCGACACGGCGATCGTGTGCCTCCTCGATGCGTACACGGAGAAGTTCACGCAGCTGAATCGGGGAAATCTGAGAGGAAGGGATTGGGAGGAGGTTGCGTTGGTGGTGAGCGAACGGTGCGAGAACCAATCGAAAAGCGTGGAACAGTGTAAGAACAAGGTCGATAATCTAAAGAAGAGGTACAAATTGGAGCGACATAGAATCAGCAGTGGATGCATTTCTACCAGTCACTGGCCTTGGTTCAAGCAATTGGAGCAGATCGTCGGGAATTCTCTTCCGGCGAAATTCTCCGATGAGGATAAAGCGGTTGTTTCTGCCGGAACTTCGCCCAGGCAATCGAAGAGATATGGAGTGGCAACACCCAGCACTGGAGGTCAAGCGAATAACATGAGATCAAAAGCACTGACAAACCTTAGATGGAGGAGGGTAGTCTTCAAAATTAGTGGAGCAGCTCTCACTGGATCTGATACCTGCAACATTGACCCTGAGGTGGCTATGTTAGTTTCAAGAGAAGTTGCCATAGCTACCCGCCATGGTGTTGAGGTGGCGATTGTTGTTGGAGGTCGTAATTTCTTCTCTGGTAATGCATGGGTAACTGCGACAGGTTTAGAAAGATGTACGGCATACCAAGTTGGCATGATGGCAACAGTGATGAATTCAATATTGCTCCAATCGACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAATTGCCATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCCATCAGACATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATCAGTTTTGGTGCTGGCAATCCACTTTTCTCAACTGACATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTGAAGCTGTCCTCAAGGGTACTAATGTAGATGGTGTGTATGACTGCAACTCACGAGATAACAATTTCACTTTTGAGCACATATCCTTCAGAGAGCTGGGGTCAAGAGGAGTCACCTCTATGGATGCGTCAGCACTGACATTCTGCAATGATAATGCCATTCCTGTGGTGGTTTTTAATCTGCTGGAGCCAGGGAACATCTCTAAAGCTTTATGTGGAGAACAAGTTGGCACGCTAATTGATCAAACTGGAGCAGTAAGCTAA 1443 0.508 MASCDDDDEFSLLRDDNHHLHQPYAPHHHFSPSAVAVAPVPPKPVADDEDYGNPFDDDGSEKRKDREEISEGAASYGFNKRSKAPPSSAGSAEYRKDREEWSDTAIVCLLDAYTEKFTQLNRGNLRGRDWEEVALVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRISSGCISTSHWPWFKQLEQIVGNSLPAKFSDEDKAVVSAGTSPRQSKRYGVATPSTGGQANNMRSKALTNLRWRRVVFKISGAALTGSDTCNIDPEVAMLVSREVAIATRHGVEVAIVVGGRNFFSGNAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSIAMQEFAEPYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELGSRGVTSMDASALTFCNDNAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAVS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01114 480 PANTHER URIDYLATE KINASE 94 479 - -
Lapu7g01114 480 SUPERFAMILY Carbamate kinase-like 240 473 IPR036393 -
Lapu7g01114 480 Gene3D - 232 479 IPR036393 -
Lapu7g01114 480 Hamap Uridylate kinase [pyrH]. 239 474 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lapu7g01114 480 Gene3D - 101 164 - -
Lapu7g01114 480 MobiDBLite consensus disorder prediction 56 71 - -
Lapu7g01114 480 CDD AAK_UMPK-PyrH-Ec 242 474 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lapu7g01114 480 FunFam Aspartate/glutamate/uridylate kinase family protein 101 164 - -
Lapu7g01114 480 FunFam Uridylate kinase isoform A 233 479 - -
Lapu7g01114 480 Pfam Myb/SANT-like DNA-binding domain 98 188 IPR044822 -
Lapu7g01114 480 MobiDBLite consensus disorder prediction 211 230 - -
Lapu7g01114 480 Pfam Amino acid kinase family 243 453 IPR001048 -
Lapu7g01114 480 MobiDBLite consensus disorder prediction 19 96 - -
Lapu7g01114 480 Coils Coil 141 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01114 Lapu-Chr7 22445037 22450154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01114 74 192 Trihelix Transcription Factor Family AT3G14180 38.525 1.14e-17 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu7g01114 AA_kinase 1.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01114 - - gmx:100805459 842.417