Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01108 ATGGGGGACAAGCACCATCTAGACGACAGCAGCGATTTCACCTCCGAGGACGAAGGCACCGAGGATTACCGCCGTGGTGGCTACCACGCTATCCGAATCGGCGACACCTTCAACGCCGGTCGCTACGTCGTTCAGTCTAAGCTCGGTTGGGGTCATTTCTCCACTGTCTGGCTGGCTTGGGACATCAAACATTCTAGATATGTGGCTTTGAAGGTTCAAAAGAGTGCTCAGCACTACACCGAGGCGGCCATGGATGAGATAACGATTTTGCAACAGATTGCGGAGGGAGACCCTGACGATAAGAAATGTGTGGTGAAGCTTTTGGACCATTTCAAGCATTCTGGTCCCAATGGGCAGCATGTCTGCATGGTGTTTGAGTACCTTGGGGATAATCTTTTGACACTTATTAAATACTCCGATTACCGCGGGTTGCCTATCGCCATGGTTAAGGAGATTTGCTTTCATATTCTGGTTGGATTGGATTACTTGCACAAACAGCTTTCCATCATACATACTGACTTAAAGCCTGAAAACATCCTGCTCTTGTCGATGATTGATCCATCTAAGGATCCTAGGAAGTCTGGGGCGCAGCTTATTCTTCCTAATAATAAAGATAAGATGGTGCTGGAATCGGCAGGTGTGAAGGATACGAAGATGTTGAATGGGGATTTGGTTAAGAATCACAAGAAGAAGATTAAGAGAAAAGCTAAGCAGGCAGCACATGGTTGTTTTGAGAAGGAAGCTTCTGAAGGAGTTGAGGGTAATCCTGAAACTTCTGGGGCTGTGGAATCGGTGGAGTCGTCTCCTAGTGCGAAGTCTGCAAGAGAACAGGCTTCCAGTTCCGCGGGAACAAGTAGGTTATCAGATGCTGATGGAACAAAGCTGAAAGAGCAGGGTAACAAAAGAGGAAGCCGATCGATGAGACAGAAGCTGCTGGCATCAGTTGATCTCAAGTGCAAGTTAGTGGACTTTGGTAATGCCTGCTGGACGTATAAGCAGTTTACTAATGATATCCAGACAAGACAATATCGGTGCCCAGAGGTGATCCTTGGGTCAAAATATTCTACGTATGCAGATCTTTGGTCTTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGAGATGTGTTATTTGATCCTCACAGTGGTGACAACTTTGATAGGGATGAGGACCACTTAGCGTTAATGATGGAACTTCTTGGAATGATGCCACGTAAGATAGCACTAGGGGGGCGTTATTCCCGTGATTTCTTTAATAGATATGGTGACTTAAGGCACATCCGAAGATTGCGATTCTGGCCCTTGAATAAAGTCCTCATGGAGAAGTATGATTTCAGTGAGAAAGATGCAAATGATTTGACGAACTTTTTGGTTCCTATCCTTGATTTTGTTCCTGAAAAGCGGCCTACAGCTGGTCAGTGCCTTCTGCATCCATGGATCAATGTAGGTCCACGTCTTTTGGAGCCATCTGTCGTGCCTTCTAATCACAACCCAGCTGCTGAAACTGCTGTTTTGGATCAGAAGAAAAGGGAAAAGGACGAGAGGGAGGCCATGGAGGCAGGAATGGGAAATATTGTTATCAATTCAGATTCTAAATCACTGATGCAATCGCCATCAAAGAAAGCTTTCCAAGGCGCCCAGCAGTAG 1644 0.4605 MGDKHHLDDSSDFTSEDEGTEDYRRGGYHAIRIGDTFNAGRYVVQSKLGWGHFSTVWLAWDIKHSRYVALKVQKSAQHYTEAAMDEITILQQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGLPIAMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAQLILPNNKDKMVLESAGVKDTKMLNGDLVKNHKKKIKRKAKQAAHGCFEKEASEGVEGNPETSGAVESVESSPSAKSAREQASSSAGTSRLSDADGTKLKEQGNKRGSRSMRQKLLASVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTYADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLMEKYDFSEKDANDLTNFLVPILDFVPEKRPTAGQCLLHPWINVGPRLLEPSVVPSNHNPAAETAVLDQKKREKDEREAMEAGMGNIVINSDSKSLMQSPSKKAFQGAQQ* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01108 547 FunFam CMGC/SRPK protein kinase 28 127 - -
Lapu7g01108 547 CDD STKc_SRPK 31 479 - -
Lapu7g01108 547 MobiDBLite consensus disorder prediction 290 304 - -
Lapu7g01108 547 MobiDBLite consensus disorder prediction 1 21 - -
Lapu7g01108 547 MobiDBLite consensus disorder prediction 503 518 - -
Lapu7g01108 547 MobiDBLite consensus disorder prediction 243 307 - -
Lapu7g01108 547 MobiDBLite consensus disorder prediction 260 288 - -
Lapu7g01108 547 Gene3D Transferase(Phosphotransferase) domain 1 125 480 - -
Lapu7g01108 547 SUPERFAMILY Protein kinase-like (PK-like) 36 490 IPR011009 -
Lapu7g01108 547 MobiDBLite consensus disorder prediction 525 547 - -
Lapu7g01108 547 FunFam Serine/threonine-protein kinase SRPK-like protein 309 479 - -
Lapu7g01108 547 Pfam Protein kinase domain 312 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01108 547 Pfam Protein kinase domain 42 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01108 547 Gene3D Phosphorylase Kinase; domain 1 18 124 - -
Lapu7g01108 547 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Lapu7g01108 547 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 12 506 - -
Lapu7g01108 547 MobiDBLite consensus disorder prediction 503 547 - -
Lapu7g01108 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Lapu7g01108 547 ProSiteProfiles Protein kinase domain profile. 42 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01108 547 SMART serkin_6 42 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01108 Lapu-Chr7 22247572 22262303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01108 7 531 EF-hand Containing Proteins AT5G22840 68.939 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Lapu7g01108 Pkinase 1.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01108 K08832 - gmx:100803070 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01108 7 22247572 22262303 Lapu7g01108 7 22247572 22262303 ECH