Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01088 ATGGATTCTGCCCCCAACCTTTCCACTCATTCCCCAAACCACACCTCCACTCCCCACCGCCGTGTCAATGGCTTCCTCGTCTACACTCGCCGCTGCAAGCGCTCCCTCCATTCAACCAATGATGCCGCGAAGCGACTCAAAATTGAAGAAATTAAAATCGAAGAATCTCGCCGCAACTCTGTTTTCAAGCTCCCTAAGGTGGAGTCCCGGGACGAGTCCGTTTCTGCCGATGAATTAACCAAAACGGAATTAGTTTCTGCCGAGGAATTAACCAAAACGGAATTAATTATACCGCAGAAGAAGATAGTCGTGATTAACAAGAAGCCTGTTACAGTCAAGGAGCTCTTTGAAACTGGCTTGCTCGAGGGGATTCCGGTCGTTTACGTGGGTTGCAAGAAGGATTCAACTTCAGAATTGCGGGGTGTAATTACAGATGGGGGGATCTTGTGCTCATGCCGTCTGTGCAATGGATGCAGGGTTATTCCACCTTCCCAATTCGAGATCCATGCATGCAACATATATAAGAGGGCAGCACAATATATTTGTCTTGAAAATGGGAAGAGCCTGCTTGAACTATTGAGAGCATGCAGGGCAGCTCCGCTACATACTTTAGAGACTACCATTCAAAATTTTGTTAGTTCTCCACCAGAGGAAAAATATTTTACTTGCAAAAGTTGCAGAGGATGTTTTCCTGCTTCCAATGTGGAAAGAGTGGGGCTTTTGTGTCTATCATGCGTGGAATCAAGGAAATCTGAAAGTAGTTCTATTCATGCTGTTGGCAAAAGAGTCAGGACCCCTCGACCAGTATTATTCTCCCGTTCATGTTCTTGTTGTACTTCTGAACTGTGTATATCTACTCAAACTAAGAGACACTGGAAGACAAGGACAAAGTCATCAAAACTGTCGTTAAAATTGAAGACTGCTCCAATAACTTCAAAGTGTTTATCTCCACAAAATAAAAGTCAGTGGAGGATCTCTAAAAGGTATCAACGAATACATAAATTGATTTTTGAAGAGGATGGATTGCCTAATGGAGCTGAAGTAGCTTATTATGCACGAGGACAGAAATTGCTTGAGGGTATCAAAACACGTTCTGGAATTGTCTGTCGATGCTGCAACACTGAGATCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAGGAAACCTTATGCATACATCTACACATCGAATGGGGTGTCACTCCATGAGTTAGCAATATTTCTCTCAAAAGACCACAAATGCACCACAAAGCAGAATGATTATGCATGTGTTGTTTGTTGGGATGGTGGAAACCTGTTGCTCTGTGATGGATGTCCTAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTATTCCCCGGGGTGAGTGGTACTGTCAAATTTGTCAACACACGTTTCTCAGAGAAAGGCCTGTGTTATACAATGCCGATGCTGTGGCAGCTGGAAGGGTAGAAGGTGTTGATCCTATTGAGGAGATTGCCAAGAGATGCATTCGCATAGTAAAAGACATAGGAGCTGAGATTGGTGGATGTGTTTTATGCAGGAGTTCTGACTTCAGCAGATCAGGATTTGGTCCTCGCACAATTATAATTTGTGATCAGTGTGAAAAGGAATATCATGTTGGCTGCTTGAGGGATCATAAGATGGCATTTTTGAAGGAATTGCCAGAAGGGGATTGGCTTTGTTGTAATGATTGCACCAGAATACATACTACTTTGGAGAATCTCCTGGTTACGGTGGCTGAGAGACTCCCTGAATCTCTTTTGGATGTTATAAAGATGAAGCATGTGGACAGATGTTTAGAACCCCTTAATGAGATTGATGTTAGATGGAAACTTCTTAACGGAAAAATTGCGTCTCCTGAAACTAGGCCATTGCTTTTGGAGGCAGTGGCCATGTTTAATGAATGCTTTGATCCTATAGTTGATCCAGCTGCTGGACGCGACCTCATTCCTGCCATGGTTTATGGAAGGAATTTGCAGACTCAGGATTTTGGAGGAATGTATTGTGCATTGTTGATTGTCAATTCATCAGTGGTATCCGCGGGCATGCTTCGAATATTTGGTAAAGATATTGCCGAACTCCCCATAGTTGCAACAAGATATAAGAACCGTGGGAAGGGCTACTTCCAAACACTTTTCTCGTGCATCGAGAGGCTGCTGGCTTTCTTGAAAGTGAAAAATCTGGTGCTACCGGCTGCTGAAGAAGCAGAATCTATATGGACAGAAAAATTCGGGTTTTGCAAGATGAAACCCGACCAGCTTACCAACTATAGAATGAACTGCCATCAGATCATGGCATTTAAGGGGACAATAATGCTTCATAAAACGGTGCCTCGTTGTCGGGTCATCAATACTCAATCATGA 2379 0.4367 MDSAPNLSTHSPNHTSTPHRRVNGFLVYTRRCKRSLHSTNDAAKRLKIEEIKIEESRRNSVFKLPKVESRDESVSADELTKTELVSAEELTKTELIIPQKKIVVINKKPVTVKELFETGLLEGIPVVYVGCKKDSTSELRGVITDGGILCSCRLCNGCRVIPPSQFEIHACNIYKRAAQYICLENGKSLLELLRACRAAPLHTLETTIQNFVSSPPEEKYFTCKSCRGCFPASNVERVGLLCLSCVESRKSESSSIHAVGKRVRTPRPVLFSRSCSCCTSELCISTQTKRHWKTRTKSSKLSLKLKTAPITSKCLSPQNKSQWRISKRYQRIHKLIFEEDGLPNGAEVAYYARGQKLLEGIKTRSGIVCRCCNTEISPSQFEVHAGWASRRKPYAYIYTSNGVSLHELAIFLSKDHKCTTKQNDYACVVCWDGGNLLLCDGCPRAFHKECASVSSIPRGEWYCQICQHTFLRERPVLYNADAVAAGRVEGVDPIEEIAKRCIRIVKDIGAEIGGCVLCRSSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAFLKELPEGDWLCCNDCTRIHTTLENLLVTVAERLPESLLDVIKMKHVDRCLEPLNEIDVRWKLLNGKIASPETRPLLLEAVAMFNECFDPIVDPAAGRDLIPAMVYGRNLQTQDFGGMYCALLIVNSSVVSAGMLRIFGKDIAELPIVATRYKNRGKGYFQTLFSCIERLLAFLKVKNLVLPAAEEAESIWTEKFGFCKMKPDQLTNYRMNCHQIMAFKGTIMLHKTVPRCRVINTQS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01088 792 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 511 573 - -
Lapu7g01088 792 ProSitePatterns Zinc finger PHD-type signature. 427 466 IPR019786 -
Lapu7g01088 792 MobiDBLite consensus disorder prediction 1 22 - -
Lapu7g01088 792 SUPERFAMILY FYVE/PHD zinc finger 509 569 IPR011011 -
Lapu7g01088 792 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 513 573 IPR013083 -
Lapu7g01088 792 ProSiteProfiles Zinc finger PHD-type profile. 424 469 IPR019787 -
Lapu7g01088 792 SMART PHD_3 514 571 IPR001965 -
Lapu7g01088 792 SMART PHD_3 426 467 IPR001965 -
Lapu7g01088 792 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 413 490 - -
Lapu7g01088 792 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 412 488 IPR013083 -
Lapu7g01088 792 SUPERFAMILY FYVE/PHD zinc finger 412 469 IPR011011 -
Lapu7g01088 792 PANTHER AUTOIMMUNE REGULATOR 29 781 - -
Lapu7g01088 792 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 665 755 IPR016181 -
Lapu7g01088 792 Pfam Tify domain binding domain 361 410 IPR032308 -
Lapu7g01088 792 Pfam Tify domain binding domain 141 196 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01088 Lapu-Chr7 21809380 21820479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01088 101 789 PHD Transcription Factor Family AT2G36720 50.412 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01088 - - gmx:100816654 1350.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01088 7 21809380 21820479 Lapu7g01088 7 21809380 21820479 ECH
Lapu6g00569 6 5944110 5949002 Lapu7g01088 7 21809380 21820479 PCT