Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01063 ATGCTAGGGAAAAAGATGGTATCATTGAAGAAACTGGCAAGGAAAGTGAAGGCTGCTGGTGGAGCTGACACTGACCCTCCCTACCAAGAATGCTTGCTAAAGGGGTATGAGGAGGAAAAGGAATCTCCCTCTAGCGTAACTCCAACTGGGTTTTTTGCACTTTACGTTGGCAATGAACGCCAGAGATATGTGGTCCCAACCAGCTACCTTTCCCACCCTCTATTCAAGATGCTGCTGGAGAAGGCCTACAATGAATTTGGCTTTGCTCAGAGGAATGGCCTAGTGGTTCCATGCAGTGCTTCAGCATTTCAAGAGGTGGTGAATGCTATTGAATGCAACAATGGCAAGTTTGACTTAGGAAAACTTTTTGAAGATTTTGCTTAA 384 0.4531 MLGKKMVSLKKLARKVKAAGGADTDPPYQECLLKGYEEEKESPSSVTPTGFFALYVGNERQRYVVPTSYLSHPLFKMLLEKAYNEFGFAQRNGLVVPCSASAFQEVVNAIECNNGKFDLGKLFEDFA* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01063 127 Pfam Auxin responsive protein 24 109 IPR003676 GO:0009733
Lapu7g01063 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01063 Lapu-Chr7 20456243 20456626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01063 43 113 Calmodulin-binding Proteins AT5G20810 49.296 1.09e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01063 K14488 - gmx:100790208 237.654