Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01040 ATGGAAAAGGATCCCATGGGTGAAAAGGCCAGGCGACACAAGATTGCATTAGGCATAGCAAGAGGTCTAGCTTATCTTCACACAGGACTAGAAGTTCCTGTCACTCATGCAAATGTAAGGTCCAAGAATGTGCTTGTGGATGACTTCTTTGCAGCCAGGCTAACTGATTTTGGCTTGGACAAGTTGATGATTCCTTCCATAGCAGAAGAAATGGTGGCGCAGGCCAAGACTGATGGCTACAAGGCCCCCGAGCTTCAAAGAATGAAGAAATGTTGCTTCAGGACTGATGTATATGCTTTTGGCATACTACTGCTTGAAATCTTGATTGGTAAGAAGCCTGGAAAGAATGGAAGAAGTGGTGAGTACGTGGACTTGCCCTCAATGGTGAAGGTGGCAGTTTTGGAGGAGACAACAATGGAAGTGTTTGATGTGGAATTGTTGAAAGGGATAAGAAGTCCTATGGAAGATAGGTTGGTCCAGAACCTGAAGTCGGCAATGGGGTGTCTGTGCACCTGTGGCATCTGTGAGGCCAAGCATGGATGA 543 0.4641 MEKDPMGEKARRHKIALGIARGLAYLHTGLEVPVTHANVRSKNVLVDDFFAARLTDFGLDKLMIPSIAEEMVAQAKTDGYKAPELQRMKKCCFRTDVYAFGILLLEILIGKKPGKNGRSGEYVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDRLVQNLKSAMGCLCTCGICEAKHG* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01040 180 SUPERFAMILY Protein kinase-like (PK-like) 11 153 IPR011009 -
Lapu7g01040 180 Gene3D Transferase(Phosphotransferase) domain 1 2 172 - -
Lapu7g01040 180 Pfam Protein kinase domain 11 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01040 180 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01040 180 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 10 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01040 Lapu-Chr7 18506701 18507399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01040 3 168 Receptor kinase-like Gene Family AT3G24660 74.850 2.32e-84 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu7g01040 Pkinase 5.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01040 - - gmx:100791722 289.656