Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00981 ATGTCACAGAATTCTGAGGAGATAAAGACAGTTGAACAGTGGAGATGGTCTGAAATGCAAGGCCTTGAGCTTATGTCTTCTTCTGCTCCTGTTTCTGACTCACATGAATCAAACCCAACATTGGAAGGGAAAGGAGAAGAAAGGGTAATGGAGGAGGCTTCACTGGCCAAGAAAGATGCTGTTTCTAATGGTCCTTGTAGTGCTGGTGGTGTGGATAAGAAGGGTGAGAGTATTTCTTCTGTTCGGTTTGCTGAGCTTTTCAGATTTGCTGATGGGTTGGATTACATTTTAATGGCAATTGGAACGGTTGGAGCATTTGTACATGGTTGCTCCTTGCCACTCTTTCTTCGTTTCTTCGCTGATCTCGTGAATTCGTTTGGTTCCAACGCGAATAACTTGGACAAGATGACTCAGGAAGTGGTGAAGTATGCGTTTTACTTCCTGGTGGTGGGGGCTGCCATATGGGCATCCTCCTGGGCAGAGATTTCGTGCTGGATGTGGACAGGTGAGAGGCAATCAACGAGAATGAGGATCAGGTATCTGGAAGCAGCTTTGGAGCAGGACATTCAATTCTTTGACACTGAGGTTCGAACATCCGATGTTGTTTTAGCCATTAACAGTGATGCTGTCATGGTACAGGATGCCATTAGCGAGAAGTTGGGCAATTTCATTCACTACATGGCTACATTTGTTTTTGGCTTCGTTGTGGGTTTCACTGCGGTTTGGCAGTTGGCACTGGTTACCCTCGCTGTGGTCCCTATAATTGCAGTAATCGGAGGCATTCACACTACCACCTTGGCCAAGTTATCTAGTAAAAGCCAGGAAGCTCTTTCTCAAGCTGGTAACATTGTGGAACAGACAGTTGTTCAAATTCGAGTGGTTTTGGCGTTTGTTGGGGAGACTAGAGCACTGCAGGCCTATTCCTCGGCGTTGAGGACAGCACAGAAGATTGGCTACAGGACTGGATTTGCAAAGGGGATGGGATTGGGGGGCACTTACTTTGTTGTTTTCTGTTGCTATGCTCTTTTGCTTTGGTATGGTGGCTATTTGGTTAGGCACCACTACACCAACGGAGGACTTGCCATTGCCACCATGTTTTCTGTTATGATTGGTGGACTGGCTTTAGGACAGTCTGCACCAAGCATGGCTGCATTTACAAAGGCCAGAGTTGCTGCTGCAAAGATTTTTCGTGTGATAGATCACCAGCCGGGTATAGACAGAAAGAGTGAATCAGGTTTGGAGTTAGAGAGTGTTACAGGACTAGTAGAGTTGAGAAATGTGGACTTTTCATACCCCTCGAGGCCAGAGATTATGATCCTCAACAATTTCTCACTTAGTGTGCCTGCTGGCAAGACCATTGCACTGGTAGGGAGCAGTGGATCAGGAAAGAGCACAGTTGTGTCCCTCATTGAGAGATTCTATGATCCTTCTTCAGGAGAAGTAATGCTAGATGGGCATGATGTTAAGTCATTGAAGCTTAGATGGTTGAGACAGCAAATAGGACTAGTGAGCCAAGAGCCTGCTTTGTTTGCTACCACAATTAGAGAAAACATACTCTTAGGTAGGCCTGATGCAGATCAGGTTGAGATTGAAGAAGCTGCCAGAGTGGCCAATGCGCACTCCTTTATCATCAAACTTCCTGAAGGTTATGAAACTCAGGTAGGAGAGAGAGGCCTGCAGCTTTCAGGAGGACAAAAGCAGAGAATAGCAATTGCAAGGGCAATGCTGAAAAACCCTGCAATTCTTCTCCTAGATGAGGCCACAAGTGCGTTGGACTCGGAGTCAGAAAAGCTGGTTCAGGAGGCCCTTGATCGGTTCATGATTGGCAGAACAACTCTTGTAATTGCTCATCGCCTCTCCACAATTCGCAAAGCTGACCTTGTGGCTGTGCTTCAGCAAGGAAGTGTCATTGAAATTGGTACTCATGATGAGCTCTTTGCTAAAGGTGAAAATGGTGTGTATGCCAAGCTTATCAGGATGCAGGAGATGGCACATGAAACTTCTATGACTAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGCGCCAGAAACTCTGTAAGCTCACCCATTATTACACGAAATTCTTCTTATGGGCGGTCACCGTACTCACGCCGACTATCTGACTTCTCTACATCTGATTTTAGTCTGTCCCTTGATGCATCACATCCAAATTATAGGCCTGAAAAGCTTGCCTTCAAAGATCAAGCTAGTTCCTTCTGGCGACTCGCAAAAATGAACTCTCCCGAATGGCTATATGCCTTAATTGGTTCAATAGGATCTGTTGTTTGTGGATCCCTCAGTGCATTTTTTGCGTATGTTCTTAGTGCTGTCCTCAGCGTTTATTACAATCCAAACCACAGACACATGATCCAAGAAATTGAAAAGTACTGTTATTTGTTGATTGGGCTATCATCGGCTGCTCTCCTCTTCAACACATTGCAGCACTCCTTCTGGGACATTGTTGGTGAAAATCTTACAAAACGAGTGAGGGAGAAAATGCTTACTGCAGTACTTAAAAATGAAATGGCATGGTTTGATCAGGAAGAAAATGAAAGTGCTCGGATTGCAGCAAGGCTATCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATCGGATTTCAGTAATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGTACTGCAGGGTTTGTATTGCAATGGCGCCTTGCACTTGTTCTTGTAGCCGTATTCCCGGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCCGGTGACCTGGAAGCTGCTCATGCCAAGGCCACTCAACTAGCAGGAGAGGCTATAGCCAATGTAAGGACAGTTGCGGCTTTTAGTTCAGAAAAGAAAATTGTTGGCCTTTTCTCATCCAACCTTGAAACTCCACTGCGGCGCTGCTTTTGGAAGGGACAGATTTCTGGAAGTGGATATGGAATAGCTCAGTTTGCACTCTATGCTTCCTATGCACTGGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCACGGTATATCTGATTTTTCTAAAACAATCCGAGTTTTTATGGTACTCATGGTCTCAGCTAATGGTGCTGCTGAAACTTTAACCCTGGCTCCCGACTTCATAAAGGGTGGTCGTGCCATGAGATCAGTCTTTGATCTCCTTGACCGAAGAACTGAGATTGAGCCTGATGATCCAGATGCTACCCTTGTTCCTGATCACCTTCGCGGTGAAGTGGAACTTAAGCATGTTGACTTCTCTTATCCAACCAGACCAGATATATCAGTTTTTCGCGACCTCAGCCTTCGTGCCAGGGCAGGTAAAACTGTTGCCCTTGTAGGGCCTAGTGGCTGTGGTAAGAGTTCAGTTATTGCACTTATACAAAGGTTTTATGATCCAACATCCGGGCGGGTCTTGATTGATGGCAAGGACATAAGGAAATACAATCTCAAGTCTCTTAGAAGGCACATTGCTGTGGTGCATCAGGAGCCATGCCTATTCGCTACTTCAATTTATGAGAACATTGCTTATGGACATGACTCGGCTACCGAAGCTGAGATCATAGAGGCTGCAACTCTTGCCAATGCTCACAAGTTCATATCTTCTCTGCCTGATGGATACAAGACATTTGTTGGTGAGAGGGGAGTTCAACTATCCGGAGGGCAAAAGCAAAGAATAGCAATTGCTAGAGCTTTTGTGAGGAAGGCAGAACTTATGCTTCTTGATGAGGCAACAAGTGCACTTGATGCTGAATGTGAAAGGTCTGTTCAGGAGGCCTTAGACCGTGCCTGTGCAGGAAAAACTACTATCATTGTTGCACACAGGCTATCAACTATTAGGAATGTCAATCTGATTGCAGTGATAGATGATGGGAAGTTAGCAGAGCAAGGCTCCCATTCACAGTTGTTAAAGAATCACCCTGATGGGATCTATGCACGCATGATTCAATTACAAAGGTTCACAAATAACCTAGTCATTGGGATGGCCTCAGGTTCAAGTTCATCGGCAAGACCAAAAGATGATGAAAAAGAAGGCTAG 4032 0.4534 MSQNSEEIKTVEQWRWSEMQGLELMSSSAPVSDSHESNPTLEGKGEERVMEEASLAKKDAVSNGPCSAGGVDKKGESISSVRFAELFRFADGLDYILMAIGTVGAFVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIRYLEAALEQDIQFFDTEVRTSDVVLAINSDAVMVQDAISEKLGNFIHYMATFVFGFVVGFTAVWQLALVTLAVVPIIAVIGGIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGETRALQAYSSALRTAQKIGYRTGFAKGMGLGGTYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFSVMIGGLALGQSAPSMAAFTKARVAAAKIFRVIDHQPGIDRKSESGLELESVTGLVELRNVDFSYPSRPEIMILNNFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGEVMLDGHDVKSLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVIEIGTHDELFAKGENGVYAKLIRMQEMAHETSMTNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRPEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPNHRHMIQEIEKYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFSSEKKIVGLFSSNLETPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDPDATLVPDHLRGEVELKHVDFSYPTRPDISVFRDLSLRARAGKTVALVGPSGCGKSSVIALIQRFYDPTSGRVLIDGKDIRKYNLKSLRRHIAVVHQEPCLFATSIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDAECERSVQEALDRACAGKTTIIVAHRLSTIRNVNLIAVIDDGKLAEQGSHSQLLKNHPDGIYARMIQLQRFTNNLVIGMASGSSSSARPKDDEKEG* 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00981 1343 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1077 1313 IPR003439 GO:0005524
Lapu7g00981 1343 SMART AAA_5 1104 1297 IPR003593 GO:0016887
Lapu7g00981 1343 SMART AAA_5 449 635 IPR003593 GO:0016887
Lapu7g00981 1343 Gene3D ABC transporter type 1, transmembrane domain 1043 1318 IPR036640 GO:0005524|GO:0016020
Lapu7g00981 1343 FunFam ABC transporter B family member 19 1043 1065 - -
Lapu7g00981 1343 Pfam ABC transporter 1096 1244 IPR003439 GO:0005524
Lapu7g00981 1343 MobiDBLite consensus disorder prediction 24 48 - -
Lapu7g00981 1343 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 99 387 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu7g00981 1343 FunFam ABC transporter B family member 1 1067 1317 - -
Lapu7g00981 1343 CDD ABC_MTABC3_MDL1_MDL2 1077 1316 - -
Lapu7g00981 1343 FunFam ABC transporter B family member 1 412 662 - -
Lapu7g00981 1343 Gene3D ABC transporter type 1, transmembrane domain 735 1042 IPR036640 GO:0005524|GO:0016020
Lapu7g00981 1343 CDD ABC_MTABC3_MDL1_MDL2 422 661 - -
Lapu7g00981 1343 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 422 658 IPR003439 GO:0005524
Lapu7g00981 1343 MobiDBLite consensus disorder prediction 24 38 - -
Lapu7g00981 1343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1068 1316 IPR027417 -
Lapu7g00981 1343 FunFam ABC transporter B family member 1 85 420 - -
Lapu7g00981 1343 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 754 1041 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu7g00981 1343 Gene3D ABC transporter type 1, transmembrane domain 85 676 IPR036640 GO:0005524|GO:0016020
Lapu7g00981 1343 Gene3D - 412 662 IPR027417 -
Lapu7g00981 1343 Gene3D - 1066 1317 IPR027417 -
Lapu7g00981 1343 SUPERFAMILY ABC transporter transmembrane region 86 406 IPR036640 GO:0005524|GO:0016020
Lapu7g00981 1343 PANTHER ABC TRANSPORTER B FAMILY 59 802 IPR039421 -
Lapu7g00981 1343 ProSitePatterns ABC transporters family signature. 561 575 IPR017871 GO:0005524|GO:0016887
Lapu7g00981 1343 Pfam ABC transporter transmembrane region 755 1024 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu7g00981 1343 Pfam ABC transporter transmembrane region 99 371 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu7g00981 1343 MobiDBLite consensus disorder prediction 668 700 - -
Lapu7g00981 1343 SUPERFAMILY ABC transporter transmembrane region 741 1061 IPR036640 GO:0005524|GO:0016020
Lapu7g00981 1343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 661 IPR027417 -
Lapu7g00981 1343 CDD ABC_6TM_Pgp_ABCB1_D2_like 743 1059 - -
Lapu7g00981 1343 Pfam ABC transporter 440 589 IPR003439 GO:0005524
Lapu7g00981 1343 CDD ABC_6TM_Pgp_ABCB1_D1_like 98 395 - -
Lapu7g00981 1343 FunFam ABC transporter B family member 1 733 1042 - -
Lapu7g00981 1343 ProSitePatterns ABC transporters family signature. 1216 1230 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00981 Lapu-Chr7 16084583 16091438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00981 73 1338 Calmodulin-binding Proteins AT2G36910 87.845 0.0 2285