Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00951 ATGGGTTCAGATAGATCAAGATCTGTGAGATTTCAAGATGAACTTGAGACAAATAAGTTAATGGACAACAAAGAGAAACACTTGTCATTGGTGGCCTATGATGAGACGAGTGGCAAACACAAGGTTGGGAAGGATGCAATAGGAAGGTCCTGTGATGGAAGAGAACTTTCCAGGGTCTTTTCTGAGGATTATGATGGAGCACAGATTTTGATATTGGATCCTAGGGGACCTAGAGTAAATACATGGAACAAAATTTTCTTAGCAGCTTGTTTGCTTTCATTGTTTGTGGATCCCCTTTTCTTTTACTTACCAGTGGCTAAGAAAGACAAGTGCATTGATATGTCAACTGGTCTTGAAGTGTTCCTCACCATAATCCGGACTTTGATTGACGCATTTTACATTATTCAGATTTATCTTCGGTTTCAAACAGCTTATATTGCTCCTTCCTCTCGTGTTTCTGGTAGAGGAGAGCTTATTATAGACTCTTCAAAAATTGCATCAAACTACATGCGAAAAGACTTCTGGCTTGATCTAGTGGCTGCTCAACCACTTCCACAGGTATTAATATGGGCCGTAATTCCAAATCTAAAAGGGTCTCAAATGATTGCTTCAAGGCATATTTTGCGCCTTGTTTCCATTTTCCAGTACCTCTTGAGGTTGTATCTTATTTACCCTCTATCATCTGAAATCGTCAAGGCAAATGGGGTAATGATGGAAAAAGCATGGGCTGGGGCAGCATATAATCTGATGCTCTATATGCTGGCTAGTCATGTTTTAGGATCCTCTTGGTACCTGTTGTCAATTGAACGCCAGAATGAATGTTGGAAGAAAGTTTGTACACTGCAGTACCCACAGTGCCAGTATCATTACCTTGATTGCCAAAGCATGGGTGACCCAGATAGGATTGCTTGGTTAAGATCAAGCAATCTCTCAAGCCTATGTGATCAGAACAGTGATTTCTTTCAATTTGGAATTTTTACTGACGCTCTAAATTTGGAAATTACAGCCTCAAAATTCTTCAACAAGTACTATTACTGTCTGTGGTGGGGTTTAAGGAATCTAAGCTCTGTGGGACAAAATCTCTTGACAGGCACACGTGTTGCAGAGATCAATTTTGCTGTGATCATTGCAGTTCTTGGATTGGTGCTTTTTGCATTACTTATTGGCAATATGCAAACCTATTTGCAATCCACCACTACGCGACTAGAAGAATGGAGAATAAGAAGAACAGATACGGAAAGATGGATGCATCACAGGCAGCTCCCTCGTTACCTGAAGCAAAATGTGCGACGTCATGAACAATTCAGATGGGTTGCTACTAGGGGAGTTGATGAGGAAACTATTCTCAGAGACCTTCCCACCGATCTAAGACGTGACATCAAACGCCACCTTTGCCTTAATCTAGTTCGACAAGTACCGTTGTTTGATCAAATGGATGAGAGGATGCTAGATGCCATATGCGAAAGGCTGAAACCTTCTCTTTTCACTCCAGGGGCTTGTGTAGTTCGCGAAGGAGACCTTGTGAATGAGATGCTTTTCATTGTTAGAGGACGCCTAGATTCTTGCACCACCAATGGTGGCAGAACAGGTTTCTTCAACTCGTGTAGACTTGGCTCTGGTGACTTCTGTGGTGAAGAGCTTCTGCCATGGGCCTTGGACCCTCGTCCAACGGTTGTCCTTCCTTCCTCAACTCGCACAGTGAAGGCCATCACTGAAGTGGAAGCCTTTGCACTCATTGCTGGGGACTTGAAGTTTGTGGCAGCACAGTTCAGAAGGTTGCACAGCAAACAACTGAGGCATACTTTCAGGTCCCACTCCCATCAGTGGAGGACTTGGGCTGCATGCTTCATACAAGCAGCATGGTTCAGGTATAAGAGAATAAAGGAGACAAGTGAGCTGAAGAGAAAGGAGAATATGATGATGGCCTTTGTGCCTGGAACTGGCACTGAACATTTCTCTGCACCTCTGCAGGCTCCAATGGGCACAATGTATGCTGCAAAACTAGCATCCAGCCCAAGGAAAGGTAGAAGCCTGAGATACGGGCCTGAACTTGACATTCTTGGCTCACTAAGGAAGCCCCTTGAACCAGACTTTACTGATGATGATGACAGTTGA 2115 0.4359 MGSDRSRSVRFQDELETNKLMDNKEKHLSLVAYDETSGKHKVGKDAIGRSCDGRELSRVFSEDYDGAQILILDPRGPRVNTWNKIFLAACLLSLFVDPLFFYLPVAKKDKCIDMSTGLEVFLTIIRTLIDAFYIIQIYLRFQTAYIAPSSRVSGRGELIIDSSKIASNYMRKDFWLDLVAAQPLPQVLIWAVIPNLKGSQMIASRHILRLVSIFQYLLRLYLIYPLSSEIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSSWYLLSIERQNECWKKVCTLQYPQCQYHYLDCQSMGDPDRIAWLRSSNLSSLCDQNSDFFQFGIFTDALNLEITASKFFNKYYYCLWWGLRNLSSVGQNLLTGTRVAEINFAVIIAVLGLVLFALLIGNMQTYLQSTTTRLEEWRIRRTDTERWMHHRQLPRYLKQNVRRHEQFRWVATRGVDEETILRDLPTDLRRDIKRHLCLNLVRQVPLFDQMDERMLDAICERLKPSLFTPGACVVREGDLVNEMLFIVRGRLDSCTTNGGRTGFFNSCRLGSGDFCGEELLPWALDPRPTVVLPSSTRTVKAITEVEAFALIAGDLKFVAAQFRRLHSKQLRHTFRSHSHQWRTWAACFIQAAWFRYKRIKETSELKRKENMMMAFVPGTGTEHFSAPLQAPMGTMYAAKLASSPRKGRSLRYGPELDILGSLRKPLEPDFTDDDDS* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00951 704 Gene3D Jelly Rolls 472 592 IPR014710 -
Lapu7g00951 704 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 56 669 - -
Lapu7g00951 704 SUPERFAMILY Voltage-gated potassium channels 73 396 - -
Lapu7g00951 704 PRINTS EAG/ELK/ERG potassium channel family signature 137 146 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu7g00951 704 PRINTS EAG/ELK/ERG potassium channel family signature 343 360 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu7g00951 704 PRINTS EAG/ELK/ERG potassium channel family signature 437 444 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu7g00951 704 PRINTS EAG/ELK/ERG potassium channel family signature 387 396 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu7g00951 704 PRINTS EAG/ELK/ERG potassium channel family signature 254 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu7g00951 704 PRINTS EAG/ELK/ERG potassium channel family signature 369 380 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu7g00951 704 FunFam Cyclic nucleotide-gated ion channel 1 472 590 - -
Lapu7g00951 704 SUPERFAMILY cAMP-binding domain-like 403 594 IPR018490 -
Lapu7g00951 704 CDD CAP_ED 474 603 IPR000595 -
Lapu7g00951 704 Gene3D Helix hairpin bin 400 465 - -
Lapu7g00951 704 ProSiteProfiles cAMP/cGMP binding motif profile. 474 559 IPR000595 -
Lapu7g00951 704 SMART cnmp_10 474 605 IPR000595 -
Lapu7g00951 704 Gene3D - 87 398 - -
Lapu7g00951 704 Pfam Ion transport protein 81 401 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00951 Lapu-Chr7 12459462 12464145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00951 48 701 Ion Channels AT2G28260 63.456 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00951 K05391 - gmx:100804375 1335.09