Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00926 ATGGGTAACATAGGAAGCAGCGCCTCCAACAGCCGTCGGAGACACGGCGGTGGCGGCAGCGGGAGGCGGATTCACCCGCCGCCTCCTCATCCGCCGGTGATGCCTCCCCCGGAAGTCACGGCGAACCGATTCGTGTACCCTCCCGCCGCCACGCCGTATCACAACTACCCCGGGTACTATCCGCCACCGACCACCATGCCGGCGCCGTTGCCCGCTCCTTACGACCACCACCACCGTCCCGCAGTGGACCCGATGTGGGGGAGGTACCCGCCGGCTCCGGCACCGGCTCCGTATGTGGAGCACCAGAAGGCTGTTACTATAAAAAACGATGTCAACATCAAGAAGGAGACGCTTAGGATTGAGCCTGATGAAGAGAATCCTGGCCGTTTCCTCGTGACGTTTACGTTTGATGCCACCGTTTCGGGGAGCATCACCATACTTTTCTTTGCAAAAGAAGGAGAAGGTTGCATCCTAACCCCAATGAAGGAAAATGTTCTTCCACCCGTGACTGTAAATTTCCAGCAAGGTCTTGGCCAGAAGTTTAAACAGCCAGCTGGAACTGGTATTGATTTTTCAATATTTGAGGAGTCTGAGTTATTGAATGTGGGGGACATGGATGTCTATCCTGTTGCAATTAAAGCAGATGCATCCTCTGGCGATCCTGATGAATCAAAATCAAATGAAACTCCATCATCTGGTAACACAAACTCTCAGTTAACTCAAGCGGTGTTTGAGAAGGAGAAAGGAGAGTTTCAGGTGAAGGTTGTTAAGCAGATCTTATGGGTAAATGAAATGAGGTATGAACTGCAGGAGATATATGGTATTGGAAATTCAGTGGAGAGTGATTTGGATGGGAATGACCCAGGAAAAGAGTGCGTTATATGTTTGTCAGAGCCTCGTGACACAACTGTCCTTCCATGTCGCCACATGTGTATGTGTAGCGGATGTGCAAAGGTTTTGAGGTTTCAAACAAATAGATGTCCAATATGCAGACAACCAGTTGAGAGGCTTTTGGAGATCAAAGTGGGGCCTGAACCTGAGGAGTGA 1047 0.5062 MGNIGSSASNSRRRHGGGGSGRRIHPPPPHPPVMPPPEVTANRFVYPPAATPYHNYPGYYPPPTTMPAPLPAPYDHHHRPAVDPMWGRYPPAPAPAPYVEHQKAVTIKNDVNIKKETLRIEPDEENPGRFLVTFTFDATVSGSITILFFAKEGEGCILTPMKENVLPPVTVNFQQGLGQKFKQPAGTGIDFSIFEESELLNVGDMDVYPVAIKADASSGDPDESKSNETPSSGNTNSQLTQAVFEKEKGEFQVKVVKQILWVNEMRYELQEIYGIGNSVESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVGPEPEE* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00926 348 MobiDBLite consensus disorder prediction 24 42 - -
Lapu7g00926 348 MobiDBLite consensus disorder prediction 1 42 - -
Lapu7g00926 348 PANTHER MAHOGUNIN 1 341 IPR045194 GO:0061630
Lapu7g00926 348 SUPERFAMILY RING/U-box 291 337 - -
Lapu7g00926 348 Pfam Zinc finger, C3HC4 type (RING finger) 290 336 - -
Lapu7g00926 348 FunFam probable E3 ubiquitin-protein ligase LOG2 276 341 - -
Lapu7g00926 348 SMART ring_2 292 330 IPR001841 -
Lapu7g00926 348 ProSiteProfiles Zinc finger RING-type profile. 292 331 IPR001841 -
Lapu7g00926 348 MobiDBLite consensus disorder prediction 215 236 - -
Lapu7g00926 348 CDD mRING-HC-C3HC5_MGRN1-like 290 331 IPR045195 -
Lapu7g00926 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 341 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00926 Lapu-Chr7 11507375 11511943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00926 87 311 C3H Transcription Factor Family AT3G09770 64.530 5.05e-103 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00926 - - gmx:100789032 574.318