Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00925 ATGTATAACCGTGTATTCTCGGTTTACTCAAAAATGGTCTTTATCATTTTCTCCACACGCTCTTCTCCTTCTCCAAAACCTTCTTATAGAGCCCGAAACCCCAATATCCAAGGGACTGTTACTCTTATCACAAGACAAGACATGAAGATTCCTTTTTTTTCTTGTTTCTCTTCATCCACCAAAGAACAAAACAATAACGAGTACCCAGAGGAAGAAATCAACGATGGGAGCTTCCGTGTGTTCACTTACAACCAATTGAAATTGGCCACGCGTAATTTCCATTCCTCGGAGAAGGTTGGAGAAGGTGGCTTTGGCTCTGTCTATAAGGGGAGGCTTGTGGATGGTTCTTTTGTGGCGGTGAAGGTGCTTTCGGTTGAGGTGGAATCCATGCGAGGAGAGAGGGAATTTGTGGCGGAATTGGCTACACTTGCAAACATCAAGCACCAAAATCTCGTAAGCCTGAAAGGGTGTTGTGTGGAAGGTGTTCACAGATATTTGGTCTATGATTACATGGAGAACAATAGTCTCTATAAAACTTTCTTAGGTTCGGAGGAGAGAAGAATGAGATTCAATTGGGAAACAAGGAAGGAAGTATCCATAGGGGTGGCTCGGGGACTTGACTTTCTCCACGAAGAGCTTAAGCCTCATATCGTACATAGAGACATCAAGGCCAAAAATATTCTTCTTGATTGGGATTTCACTCCAAAGGTTTCAGATTTCGGTTTGGCAAAATTGCTGAGAGACGAAGCTTCTTACATCAGCACTCGCGTTGCAGGGACATTGGGTTATCTAGCTCCAGAATATGCCAATTCAGGACAGGTTTCACGAAAATCAGATGTTTATAGCTTTGGAGTGTTACTTCTGCAAATTGTGAGTGGCCTAGCAGTGGTGGATGCCTATCAAGACATTGAACGTTTCATAGTGGAGAAGGCGTGGGCAGCGTATCAATCTAACGATTTATTAAAACTGGTGGATCCTATGCTGAACATGAACTTTCCCGAGGAAGAAGCCATAAAATTCCTCAAGGTGGGCCTACTCTGCGTACAAGAAACTGCGAAGCTTCGGCCACGAATGTCAGAGGTTGTGGAGAAGTTTACCAACAACGTTGATATGAAAGATGTTCACATTTCGAAACCAGGGTTCGTTGCTGATCTCAGGAACATCAGAATCAAAAACCAAAACTCGTCCCAGGAAATAACTTCTGCTGGAGCAACCTTCGCAAGCTCCATTTGGAGTTCAGCCAATCTTGCTCGTTAG 1257 0.4375 MYNRVFSVYSKMVFIIFSTRSSPSPKPSYRARNPNIQGTVTLITRQDMKIPFFSCFSSSTKEQNNNEYPEEEINDGSFRVFTYNQLKLATRNFHSSEKVGEGGFGSVYKGRLVDGSFVAVKVLSVEVESMRGEREFVAELATLANIKHQNLVSLKGCCVEGVHRYLVYDYMENNSLYKTFLGSEERRMRFNWETRKEVSIGVARGLDFLHEELKPHIVHRDIKAKNILLDWDFTPKVSDFGLAKLLRDEASYISTRVAGTLGYLAPEYANSGQVSRKSDVYSFGVLLLQIVSGLAVVDAYQDIERFIVEKAWAAYQSNDLLKLVDPMLNMNFPEEEAIKFLKVGLLCVQETAKLRPRMSEVVEKFTNNVDMKDVHISKPGFVADLRNIRIKNQNSSQEITSAGATFASSIWSSANLAR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00925 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Lapu7g00925 418 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 38 402 - -
Lapu7g00925 418 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g29720 171 368 - -
Lapu7g00925 418 FunFam Serine/threonine-protein kinase receptor 61 170 - -
Lapu7g00925 418 CDD STKc_IRAK 99 367 - -
Lapu7g00925 418 Gene3D Phosphorylase Kinase; domain 1 54 170 - -
Lapu7g00925 418 Gene3D Transferase(Phosphotransferase) domain 1 171 378 - -
Lapu7g00925 418 ProSiteProfiles Protein kinase domain profile. 93 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00925 418 Pfam Protein kinase domain 93 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00925 418 SUPERFAMILY Protein kinase-like (PK-like) 77 385 IPR011009 -
Lapu7g00925 418 ProSitePatterns Protein kinases ATP-binding region signature. 99 121 IPR017441 GO:0005524
Lapu7g00925 418 SMART serkin_6 93 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00925 Lapu-Chr7 11474735 11477035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00925 80 409 Receptor kinase-like Gene Family AT1G07650 46.765 2.44e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g00925 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00925 - - gmx:100801728 671.389