LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu7g00924	ATGCAAAATCTCCCTACCCTCTCTCTCTTTCTCTTGTTCTTCTATGGCACTGCACACGGGTTCGGCGCCATGGGTCCAATCTCCGCGTCATTCGGAAACAACGAGATTTTCTGCGCCATTGATGCTAGCGGGAAGCAAGACGTCATTTGCTGGGGGAACAACGCCACGTCACCGTCTCTCTCCTCTGTTACGAACGCCGTTCCTGCCATGTCAGCACTCTCCGGCGGGGAAGGCTTTCTCTGCGGCATTTTAGCCAACACCTCGCAAGCGTTCTGCTGGGGCGCTGTCACGAAACCCAGCGCAGATCTCGTCCTCGTGCCGCCGGCGTACCGGAACACTGCTTATTCCCACATCGCCGCCGGCAAGAGCCACGTGTGCGCCGTCCGAGGATCCTACTATGCCGATCGCGATTCCGGCACCGTGGATTGCTGGGAAGTCACGACAACCGCAAACAAAACGTTGACAGCGAAACAGAGTGACTTGTTTCTCAACCAAGCCGTGATGAATCTGGAGGTGAAGAGGGTTGTTTCCGGGGAAGGGTTCACCTGTGGCGAGGTCAGAGACGGTGGACTGATATGTTGGGGACCTAACTCTGGAGGGATAAGAGTTTCCAATGTTTCCGAGAGTTTCGCGGTTTTGGCGGCGGGTAAGAGCGCCGTGTGCGGCGTTTTCAACGTTTCCGGCGAGTTGAAATGCTGGGGCGACTCGAGTTCGTTTTCGGATCCTCCACTGGATTCGGTTCGTCTGGTGTCTCTATCCGCTGGGGCTAACCATTTCTGCGGCATTAGAATGGATAACCATGAAGTGGAGTGTTGGGGTGATTTGAATTCTTCGGTAATTCCTCGAGGGAACAGTTTCATGGCTATTGCTTCTTCGGATTTCACCACGTGCGGGATCAGGGAAGATGACCTTCTTCTGGATTGTTGGATGGTGAATGCTTCGAAACCCGATTTTGATCCTCCTTTGGAGCTTTCGAGTCCTGGACTCTGCAGGGCTAGTTCTTGTGGGATTGGTGAGTTTGCTTTCAATGTGAGTATGCTTAACGAGATAGCTTTGACTAGCCTTTGTGTTAGAGAGGATTTGAGGATTTGTTCGCCTTGTGGGTCAAATTGTTCTAAAGGATTCTTCTTGTCAAGTCCGTGTACTAAAAATGCTGATAGAGTTTGCACCGCTTGTTCTGTTTGTCAGAACAGCTCTTGTTTTAGCGTATGTGGACTTCACTCCTCAACGGGTCTGCATATGCATTGGCACTGGCATCATTTGCGTAAATGGATGGTTATAGCTGGGTGCTCCGTGTTGGGGGTTTTGATCATTTTGCTTTGCGGGTGTCTTTTTTCCGTCAGAAAGAGGACAAAGAAACAATCCAAGTCCTGCATGGGGAAACAGGAGAAAGAGGATGATCATGTCAATGTCGCTCTTCAATCAACACCTTCTGTTAATTCTTGTCCCGGGGTGCCTCAGGTTTTCAGGCTCTCTGAACTGAAGGATGCTACGAACGGGTTTAAGGAGTTTAATGAACTTGGGAGAGGAAGTTATGGGTTTGTGTACAAAGCCTTGTTGGCTGATGGGAGAGTGGTTGCTGTTAAAAGAGCAAATGCTGCTACCATAATCCACACCAATAATCGTAATTTTGAAATGGAACTAGAAATTCTCTGCAAAATTCGCCATTGTAATATTGTTAATTTGTTGGGGTATTGCGCGGAGATGGGAGAGAGGTTGCTTGTTTACGAGTATATGCCTCATGGAACTCTTTATGATCACCTCCATGGTGGTCTTTCTCCTCTTAATTGGAGCCTCAGGTTGAAGATAGCGATGCAAGCTGCAAAGGGGCTTGAGTATCTTCACAAGGAACTTGTGCCTCCAATTGTGCATAAGGATCTAAAAAGTTCCAACATTCTTTTGGATTCGGAGTGGGGGGCAAGGATTTCGGACTTTGGACTTCTTGCTTCTAGCGACAAAGATCTCAATGGGGACTTAGAAAGCGATGTTTATGATTTTGGGATTGTGATGCTAGAGATTCTGAGTGGAAGAAAGGCTTATGATAGGGATTACACTCCACCCAACATGGTTGAGTGGGCAGTGCCTTTGATCAAACAAGGGAAGGCTGCTGCTACCATTGATAGGTACGTGGCTCTTCCAAGAAATGTTGAACCTTTGCTTAAACTTGCTGATATAGCAGAACTTGCCGTGAGAGAAAATCCAAGTGAACGACCACCAATGTCAGATATAGCATCTTGGTTGGAGCAAATTGTGAAGGACGGATTGATCTTATAG	2274	0.4824	MQNLPTLSLFLLFFYGTAHGFGAMGPISASFGNNEIFCAIDASGKQDVICWGNNATSPSLSSVTNAVPAMSALSGGEGFLCGILANTSQAFCWGAVTKPSADLVLVPPAYRNTAYSHIAAGKSHVCAVRGSYYADRDSGTVDCWEVTTTANKTLTAKQSDLFLNQAVMNLEVKRVVSGEGFTCGEVRDGGLICWGPNSGGIRVSNVSESFAVLAAGKSAVCGVFNVSGELKCWGDSSSFSDPPLDSVRLVSLSAGANHFCGIRMDNHEVECWGDLNSSVIPRGNSFMAIASSDFTTCGIREDDLLLDCWMVNASKPDFDPPLELSSPGLCRASSCGIGEFAFNVSMLNEIALTSLCVREDLRICSPCGSNCSKGFFLSSPCTKNADRVCTACSVCQNSSCFSVCGLHSSTGLHMHWHWHHLRKWMVIAGCSVLGVLIILLCGCLFSVRKRTKKQSKSCMGKQEKEDDHVNVALQSTPSVNSCPGVPQVFRLSELKDATNGFKEFNELGRGSYGFVYKALLADGRVVAVKRANAATIIHTNNRNFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKIAMQAAKGLEYLHKELVPPIVHKDLKSSNILLDSEWGARISDFGLLASSDKDLNGDLESDVYDFGIVMLEILSGRKAYDRDYTPPNMVEWAVPLIKQGKAAATIDRYVALPRNVEPLLKLADIAELAVRENPSERPPMSDIASWLEQIVKDGLIL*	758

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu7g00924	757	FunFam	Serine/threonine-protein kinase-like protein CCR1	579	655	-	-
	Lapu7g00924	757	ProSiteProfiles	TNFR/NGFR family cysteine-rich region domain profile.	334	389	IPR001368	GO:0005515
	Lapu7g00924	757	ProSitePatterns	Protein kinases ATP-binding region signature.	507	529	IPR017441	GO:0005524
	Lapu7g00924	757	SUPERFAMILY	Protein kinase-like (PK-like)	477	748	IPR011009	-
	Lapu7g00924	757	FunFam	serine/threonine-protein kinase-like protein CCR1	470	578	-	-
	Lapu7g00924	757	SUPERFAMILY	RCC1/BLIP-II	168	321	IPR009091	-
	Lapu7g00924	757	Gene3D	-	22	164	IPR009091	-
	Lapu7g00924	757	Gene3D	-	165	320	IPR009091	-
	Lapu7g00924	757	SMART	serkin_6	501	747	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu7g00924	757	Gene3D	Phosphorylase Kinase; domain 1	457	578	-	-
	Lapu7g00924	757	PANTHER	SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4	8	751	-	-
	Lapu7g00924	757	ProSiteProfiles	Protein kinase domain profile.	501	747	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu7g00924	757	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	622	634	IPR008271	GO:0004672\|GO:0006468
	Lapu7g00924	757	Pfam	Protein kinase domain	501	649	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu7g00924	757	FunFam	Serine/threonine-protein kinase-like protein CCR1	656	754	-	-
	Lapu7g00924	757	SUPERFAMILY	RCC1/BLIP-II	30	129	IPR009091	-
	Lapu7g00924	757	Gene3D	Transferase(Phosphotransferase) domain 1	579	655	-	-
	Lapu7g00924	757	Gene3D	Transferase(Phosphotransferase) domain 1	656	754	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu7g00924	Lapu-Chr7	11425763	11428384	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu7g00924	18	749	Receptor kinase-like Gene Family	AT3G59420	30.740	1.74e-109	352

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Lapu7g00924		Pkinase	2e-31	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu7g00924	-		-	gmx:100814476	1380.16