Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00915 ATGCTCATAAGGGTGAGCTTTTACAAAGAGATGAGAAAAAAAGGTCATTTTACAGAGAAGCAAGCTGCCACGATTATTGGGTTTTTATTCTTGAGAAAAGATGAGTATGAGAAGAAATATATTTTGAGCCTCACAAAGGCGTTGGCTTATTGTCACGATAGGCATGTTATTCATAGGGATATCAAGCCTGAAAATTTGTTGCTTGATCACGAGGGTCGTCTTAAAATTGGAGACTTTGGTTGGTCTGTTCAGTCTAAAAGCAAAAGACATACCATGTGTGGCACATTGGATTATTTAGCACCAGAAATGGTTGAAAGTAAAGCTCATGACCATGCAGTTGATAACTGGACTCTTGGTATCCTTTGTTATGAGTTCCTCTTTGGTGCCCCTCCATTTGAGGCTGAGAGTCAAAATGATACCTTCAAAAGGATAATGAAGGTTGACCTAAGCTTCCCTTCCAACCCTTCTGTTTCTTTAGAAGCAAAAAGTCTGATTAGCCGGCTTCTGGTGAAAGACTCCTCACGAAGGCTCTCTCTTCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAGATTTTACGGGTATATGCTAG 597 0.4003 MLIRVSFYKEMRKKGHFTEKQAATIIGFLFLRKDEYEKKYILSLTKALAYCHDRHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSKSKRHTMCGTLDYLAPEMVESKAHDHAVDNWTLGILCYEFLFGAPPFEAESQNDTFKRIMKVDLSFPSNPSVSLEAKSLISRLLVKDSSRRLSLQKIMEHPWIIKNADFTGIC* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00915 198 Gene3D Transferase(Phosphotransferase) domain 1 4 196 - -
Lapu7g00915 198 Pfam Protein kinase domain 34 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00915 198 SMART serkin_6 8 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00915 198 SUPERFAMILY Protein kinase-like (PK-like) 36 191 IPR011009 -
Lapu7g00915 198 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 8 192 IPR030616 GO:0004672
Lapu7g00915 198 ProSitePatterns Serine/Threonine protein kinases active-site signature. 56 68 IPR008271 GO:0004672|GO:0006468
Lapu7g00915 198 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00915 Lapu-Chr7 11170694 11173548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00915 34 191 CBL-interacting serine-threonine protein kinases AT5G10930 43.902 2.99e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Lapu7g00915 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00915 K08850 - gmx:100800111 332.028