Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00914 ATGGGGCATAGACATTTATATAGCTCATCTCCAATGTTTGAGGGTGAACCTGACCAGAACTGGAATCATATGCATACCGATCAACAATATGTGAACCTTGGTAGGAGTACCACTTCAGACAATGGTTCTTTTATTTATCCTTTGGAAAATATGTCCATAGATAGCATCTCTTTTCCATCTCATTGGAACACTGCACCAAGGTCAAATGGATATGCCTCCACAAGTCTCAACATTGAAGCACCTCCTCATCAAACTGATGTATCAGGCACTTCTCATGATCATTTTATCCGTTCATCTAGTGGTGGAATGTTTTATGCAGTGGCTGAAAATTATGTACATCAGCCTTCTAGTTCCAATTATGACAGACAAGCATTTCCCGTTGCTGACGGGGGTTTTATTGATCTCACAATGGGAAATGGGCGAGGGCCTCACAAGCGGAAGAGTCCTGGAGTTCCTTCAGTCTGTGAGAGAGGAAGTACAAGCAGATGTTTTAATGCTGCAAGTGCAAATGCAGCTGATCGTCCTACTTCTTCAGAATTGCGGCCTGAGAAGCCCAATACGGATTCTCTATATATGCCTTGGGATCATGTTAATATGACACCCGATCATGTGAATATGACACCCACATTTAGGAGTAGAGGCCTTTCAATACGGGGTGAGACTTCTTTAAGGAATGTGAGGAGCCGTTCTGCACTTGATTTGGAATCCAACCTGGCTAGGACCCATTTATCGAATACTCATTCACACAACTCATTCTCTACTGGTCCCCAAATGGACCATTCTAGCATAGTAGATCTTTCAACTCAAACTTCTGGATCTTTGACAAGGGATTGGAGCCAAATGAGTGTATGTCCTGCTCATGGAAGGGGGCCATCATCAGATGCAAATGCTTTTAATCATGAAGCAAGTCATTTCCTTGTTGGAAGTGGTTCTAGTAATGCTCCTGTAGATGTTGGAGGTTTTCATAATGAATTTGGAACTAGCAGAAATCCTACTGCTCCACAAAGTTTTCATAATAATAGTCTGGCTCAACCTGCAAGAGGAGTTCGCAGTAACTACTCTCAAAGATCCACTCCAACTTTTAGGGCTTCCTCAAGCTTGCGCTTGGGTCGCATGGCACCTTCTGATGATGGATTGCATATGGTGGCTGAAAGTTACTCTTCTAGACATCCAAGGCCGTTGACCACGGTTGGCTGGCACAGCAATGATAGAAATGGAAGGTCAAGAATACATAGTGATAGATATCGAGCATTGGCTGATGAGGTTGGTCTCAATGATCAATTTAACTTTGAGGGTTTCATGATTGTTGATCGCACTTCACTGTATGGTAGGAATATGCTTGATCAGCATAGAGACATGAGGATGGACATAGACAACATGAGTTATGAGGAACTACTTGCACTCGGAGAGAGAATAGGCCATGTGAGCACAGGATTATCTGAGGATTTGATTTCCAAGTATTTGACAGAAACTATATACTGTTCATCCGAGCCAAGTCAAGAAGACGAAGCTTGTGCAATCTGCCTGGAAGAATACAAGAACGTGGACGATGTTGGAACACTGAAAGCTTGTGGGCATGATTACCATGTGAGTTGCATTAGAAAGTGGTTGTCTATGAAGAAAGTATGTCCTATCTGCAAAGCTTCTGCTTTGCCTGAGGAAACGAAGGATAAATAA 1677 0.4275 MGHRHLYSSSPMFEGEPDQNWNHMHTDQQYVNLGRSTTSDNGSFIYPLENMSIDSISFPSHWNTAPRSNGYASTSLNIEAPPHQTDVSGTSHDHFIRSSSGGMFYAVAENYVHQPSSSNYDRQAFPVADGGFIDLTMGNGRGPHKRKSPGVPSVCERGSTSRCFNAASANAADRPTSSELRPEKPNTDSLYMPWDHVNMTPDHVNMTPTFRSRGLSIRGETSLRNVRSRSALDLESNLARTHLSNTHSHNSFSTGPQMDHSSIVDLSTQTSGSLTRDWSQMSVCPAHGRGPSSDANAFNHEASHFLVGSGSSNAPVDVGGFHNEFGTSRNPTAPQSFHNNSLAQPARGVRSNYSQRSTPTFRASSSLRLGRMAPSDDGLHMVAESYSSRHPRPLTTVGWHSNDRNGRSRIHSDRYRALADEVGLNDQFNFEGFMIVDRTSLYGRNMLDQHRDMRMDIDNMSYEELLALGERIGHVSTGLSEDLISKYLTETIYCSSEPSQEDEACAICLEEYKNVDDVGTLKACGHDYHVSCIRKWLSMKKVCPICKASALPEETKDK* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00914 558 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 470 551 - -
Lapu7g00914 558 MobiDBLite consensus disorder prediction 345 364 - -
Lapu7g00914 558 SUPERFAMILY RING/U-box 495 550 - -
Lapu7g00914 558 ProSiteProfiles Zinc finger RING-type profile. 505 547 IPR001841 -
Lapu7g00914 558 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 141 551 IPR045191 GO:0061630
Lapu7g00914 558 CDD RING-H2_RNF24-like 503 550 - -
Lapu7g00914 558 SMART ring_2 505 546 IPR001841 -
Lapu7g00914 558 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 470 551 IPR013083 -
Lapu7g00914 558 MobiDBLite consensus disorder prediction 167 186 - -
Lapu7g00914 558 Pfam Ring finger domain 504 547 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00914 Lapu-Chr7 11153611 11162480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00914 1 557 C3H Transcription Factor Family AT2G37150 41.873 7.94e-112 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00914 - - gmx:100786013 978.008