Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00901 ATGGGGAGGAAGGGAAGTTGGTTTTCTACTGTGAAGAAAGCTCTAAGCCCTGAATCAAAGGAGAGGAACGATCAGAAAACAAGTAGACCAAAGAAGAAATGGTTTGGAAAACAAAAATTGCAGACTTCAGCATCACAATCCGAAACTGATAAAGCACCTCCTCTTCCTTCGCCTGAGGTTATTTTACCTCATGCTGAGATTGAAACCAGTCATGATCGCGTCAAAGTTGAAACTGCAGTGGTTGCTGAGGAACCTGTTCCTGCTGTTCAGACAGCACCTGTGGAGGTTCATGCCGCTACAACTGTTCAGTTGCACAGTAAACCAACAGAAGAAGTGGCAGCGATAAGGATTCAGAAAGCTTTTCGGGGATACTTGGCAAGAAGGGCGTTGCGGGCTCTAAGGGGACTGGTGAGGTTGAGATCCCTCATGGAAGGACCAGTGGTGAAACGTCAAGCCATCAGTACCCTCCGTTCTATGCAGACTTTTGCACATTTGCAAACTCAGATTCGTTCTAGGAGGCTCAGGATGTTGGAGGATAATCAAGCTCTACAGAAACAGCTCTTACAGAAACATGCAAAAGAGCTAGAGAGCATGAGGCTTGGGGAGGAATGGGATGATAGCGCACAATCAAAAGAACAGGTTGAAGCCAAGTTACTGAGCAAGTATGAAGCTGCCATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCACCAGCAAAACTGGAAGAATTCATCAAGATCCATAAACCCAATGTTCATGGATCCAACCAATCCAACCTGGGGTTGGAGTTGGTTGGAACGATGGACGGCAGCCCGACCCTCGGAGAACCATAGCCTGATGGAGAAAGAGAAGAATGAGAATAAATCTATTAGAAGTTCTGGCCGTGGCATTACCAGTGCTGAAATCAGCAAATCATTTGCTAAATTTCAGCTCAATTCTGAGAAGCATTCTCCAACGGCCAGCCAAAATCCAGGCTCGCCTAACTTTGAGTCACATTCCCAGCAATCCCATTCAAATCCCCCCAAGTCAGCTTCTCCTGCAGCTGCCAAGAAGCTGAAGAAAGTGAGCCCAAAGGACATCTTGGCTATGGATGATGACACCAAAAGTCTGGTGAGTGTGCAGTCAGAGCGGCCTAGGAGGCACTCCATTGCTGGATCAACAGTGGGAGATGATGAAAGCCTTGCAAGCTCCCCAGCAATTCCAAGTTACATGGTGCCAACTAAATCTGCCAAAGCTAAGTCCAGAATGCAAAGTCCACTGGCTGCAGAAAATGTGACCCCAGATAAAGGGTCCTCTGCTGGGACTGCAAAGAAACGTCTTAGTTTCCCTGCTTCACCCGCTAGACCAAGAAGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTCAATGCTGAAATCACTGTGGGAAATGGTGTGGCTGGTTGA 1428 0.472 MGRKGSWFSTVKKALSPESKERNDQKTSRPKKKWFGKQKLQTSASQSETDKAPPLPSPEVILPHAEIETSHDRVKVETAVVAEEPVPAVQTAPVEVHAATTVQLHSKPTEEVAAIRIQKAFRGYLARRALRALRGLVRLRSLMEGPVVKRQAISTLRSMQTFAHLQTQIRSRRLRMLEDNQALQKQLLQKHAKELESMRLGEEWDDSAQSKEQVEAKLLSKYEAAMRRERAMAYSFSHQQNWKNSSRSINPMFMDPTNPTWGWSWLERWTAARPSENHSLMEKEKNENKSIRSSGRGITSAEISKSFAKFQLNSEKHSPTASQNPGSPNFESHSQQSHSNPPKSASPAAAKKLKKVSPKDILAMDDDTKSLVSVQSERPRRHSIAGSTVGDDESLASSPAIPSYMVPTKSAKAKSRMQSPLAAENVTPDKGSSAGTAKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNGVAG* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00901 475 Pfam Protein of unknown function (DUF4005) 379 452 IPR025064 -
Lapu7g00901 475 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Lapu7g00901 475 Gene3D iswi atpase 107 134 - -
Lapu7g00901 475 MobiDBLite consensus disorder prediction 38 52 - -
Lapu7g00901 475 Pfam IQ calmodulin-binding motif 113 131 IPR000048 GO:0005515
Lapu7g00901 475 MobiDBLite consensus disorder prediction 277 291 - -
Lapu7g00901 475 SMART iq_5 109 131 IPR000048 GO:0005515
Lapu7g00901 475 MobiDBLite consensus disorder prediction 1 58 - -
Lapu7g00901 475 MobiDBLite consensus disorder prediction 15 31 - -
Lapu7g00901 475 PANTHER IQ-DOMAIN 5-RELATED 1 456 - -
Lapu7g00901 475 MobiDBLite consensus disorder prediction 312 475 - -
Lapu7g00901 475 MobiDBLite consensus disorder prediction 353 376 - -
Lapu7g00901 475 MobiDBLite consensus disorder prediction 412 432 - -
Lapu7g00901 475 MobiDBLite consensus disorder prediction 276 298 - -
Lapu7g00901 475 MobiDBLite consensus disorder prediction 312 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00901 Lapu-Chr7 10950650 10954342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00901 1 474 IQD Protein Family AT5G03040 51.139 9.96e-144 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00901 - - vun:114191598 802.742