Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00890 ATGGCCGATGCTCCCGCGAGTCCAGGCGGCGGTGGTAGTCACGAGAGCGGCGAGCACAGTCCCCGCTCCAATTTCCGCGAGCAGGACCGCTTCCTTCCCATCGCCAACATCAGCCGCATCATGAAGAAAGCGCTTCCCGCCAACGGCAAAATCGCCAAGGACGCCAAGGAAACCGTGCAGGAATGTGTATCCGAGTTCATCAGCTTCATCACCAGCGAAGCTAGCGATAAGTGCCAGAGAGAGAAGAGAAAGACCATTAACGGCGACGATTTACTTTGGGCTATGGCCACTTTAGGTTTCGAGGAATATGTCGATCCACTCAAGATTTACCTCGCCTCTTACAGAGAGATTGAGGGTGATTCAAAGGGTTCGGCCAAGGGTGGAGAGACATCTGCTAAGAGAGATGTTTATCCGAATCCTAATGTCCAGGTGGAGAATCATGCTCATCAAGGTTCTTTCTCACAAGGTGTTAACTACACGAATTCTCAGTCCCAGGGTCCACATATGATAGTTCCCATGCAAGGCCAAGAGTAG 534 0.5187 MADAPASPGGGGSHESGEHSPRSNFREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYVDPLKIYLASYREIEGDSKGSAKGGETSAKRDVYPNPNVQVENHAHQGSFSQGVNYTNSQSQGPHMIVPMQGQE* 178
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00890 177 MobiDBLite consensus disorder prediction 143 171 - -
Lapu7g00890 177 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Lapu7g00890 177 SUPERFAMILY Histone-fold 28 131 IPR009072 GO:0046982
Lapu7g00890 177 Gene3D Histone, subunit A 18 155 IPR009072 GO:0046982
Lapu7g00890 177 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 16 154 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lapu7g00890 177 FunFam Nuclear transcription factor Y subunit B-3 20 144 - -
Lapu7g00890 177 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Lapu7g00890 177 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Lapu7g00890 177 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Lapu7g00890 177 MobiDBLite consensus disorder prediction 1 28 - -
Lapu7g00890 177 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Lapu7g00890 177 MobiDBLite consensus disorder prediction 119 177 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu7g00890 Lapu-Chr7 10752100 10755642 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00890 1 177 CCAAT-HAP3 Transcription Factor Family AT2G37060 71.111 1.34e-84 245
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lapu7g00890 CBFD_NFYB_HMF 8.3e-28 CL0012
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00890 K08065 - zju:107432901 289.271