Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00883 ATGACAAGGGTTGTCCAGATGAGTGTCGATGGCGACAGCAAAGAGCTGAAAGAACTGAATCAGCGCTTGCGAGATGGGAAGAAGATTGCTGGTGGGGAACATGTGTTATGCGAGGGTGATGAAGTGAAATGTAATGGAGTAGCTGAAGAAGTTAAGGTTGGAGAGGGGGGGACTGTGGAGTCCTCCTCTGCCCAGCAGCATATTCCACAACCTCAAGGGGCAATAATATGTTGGGAGAGATTTTTGCATATTAGATCCCTTAAGGTCTTGCTTGTGGAGAATGATGACTCTACTCGTCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGATGCAGCAAACGGATTGCAAGCTTGGAAGATATTGGAGGATTTAACCAATCATATTGATCTCATTTTAACTGAAGTGGCAATGCCTGGCTTATCAGGCATTGGTCTTCTATACAAGATTATGGGCCACAAAACCCGGAAAAATATTCCAGTAGTTATGATGTCATCTCTTGATTCAATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCCGTTGACTTTCTAGTTAAACCCATACGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGAAGATGTCACAGTTCTAGTGGGAGTGGCAGTGAAAGTGGAACGCAAACGCAGAAGTCTGTAAAATCAAAGAGTCTTGAGAAGTCTGATAATAATTCTGGGAGCAATGATGAAGATGACAATGGAAGTTTAGGCCTGAATAATGGGGATGGAAGTGATAATGGTAGTGGCACTCAGAGCTCATGGACCAAACGTGCTGTAGAAGTTGATAGTCCTAAACCTGTCTCTCAGTGGGATCAAATAACTGAGTGCCCGGACAGTACCTGTGCTCAAGTTGTTCACTCCAATGCCGAAATAGGTGGCAACAAGGTGGTTCCCCTAGCTGCAAAGGAGCGTTCAGAACAGAAGGAACAACTTGGTAAGGCCAAACATAGCAATGCACCTGATGCCGGCCCCTCTAAACCACTGGACCTTAATTGTGAAAATCAATCTAGCAAGCTAAGGTGCAAAGGTTTATCATTGTCTGATGCCATTACCAGCACTTCTGATTCTCAGATGCATAGTGGAGAATTTGAAGCCTTAAATAAAAGACCGAAGTCCTCAGATATTGAAAATAAAGGTACTAATGATGATGAAAAATTGCCATCTCTTGACCTTAGTTTAAAGAGGCTTAGAGGAGTTAAAGATGCTGGTATTACAGTTCAGGATGACCGGAATGTCTTGAGACGTTCTGATCAGTCTGCTTTCTCAAGGTACAATGCTGTCTCTAACACTAAGAAATCTCCCACTGGATGTGTTGGAAGCAATTCTCCATATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCTCGTGATGTTCAATCTCATTCTAGCGGCAATCCTCCTAACCAGAATTCAAATGGTGCTAGCAATAACATTGATATGGGTTCCACTACTAATAATGCTTATGCTAAATCTGCAGTTATAAGTGAGCCAGCAGTTGCTTCAACCAAATGTTTGTACCAAACATCTGCTTTCCAGCCTATAAAAAACAACCTTGTCTGTAACTCTCAACAAGTTGTCTTACATAACACTGAAGATAAGGCAGCAACAATGCTGGCTCTACCTAAAGTAGACAGACATAAAGATTCTGCAGCTCCGGACTTCCATCTCCGTTATGAAAATAATAACTGTAGTGCTGACATGCACCAGCTGCCACCTGATCACGGTGCTGAATCTGCAAAGAAAATGGCTACTGCTGCTACTCCACATTGTGGGTCATCAAATGTGGTTGAAGTGCTAGTTGAAGGTAATGTTGGAAACCTCAGTATCAATAGAAGTGTTTCAGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCACAGCTGTTAATGCTGGAGGAACAAACATGGAAAGCAACAATGGACCCCCTGGGAATAGTGGCAGTGGAGATGCTAGTGGAAGTGGAAGTGGAAGTGCCAACAGAGTAGATCAAAACAAGACTTCTCAGAGGGAAGCAGCCTTAACTAAATTTCGCCAAAAGAGAAAAGAAAGAAAGGAGAGGTGCTTTCATAAAAAGGTTCGATATCAGAGCAGAAAGAAATTAGCTGAACAACGGCCTCGATTTCGTGGACAATTTATTCGACAGTCCTCTAACGAAAAGACAAGTGAGGCAACAACAGAAAGGTGA 2235 0.4255 MTRVVQMSVDGDSKELKELNQRLRDGKKIAGGEHVLCEGDEVKCNGVAEEVKVGEGGTVESSSAQQHIPQPQGAIICWERFLHIRSLKVLLVENDDSTRHVVTALLRNCSYEVIDAANGLQAWKILEDLTNHIDLILTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSLEKSDNNSGSNDEDDNGSLGLNNGDGSDNGSGTQSSWTKRAVEVDSPKPVSQWDQITECPDSTCAQVVHSNAEIGGNKVVPLAAKERSEQKEQLGKAKHSNAPDAGPSKPLDLNCENQSSKLRCKGLSLSDAITSTSDSQMHSGEFEALNKRPKSSDIENKGTNDDEKLPSLDLSLKRLRGVKDAGITVQDDRNVLRRSDQSAFSRYNAVSNTKKSPTGCVGSNSPYNNSLEVTKKDSSRDVQSHSSGNPPNQNSNGASNNIDMGSTTNNAYAKSAVISEPAVASTKCLYQTSAFQPIKNNLVCNSQQVVLHNTEDKAATMLALPKVDRHKDSAAPDFHLRYENNNCSADMHQLPPDHGAESAKKMATAATPHCGSSNVVEVLVEGNVGNLSINRSVSGSNNGSNGQNGSSTAVNAGGTNMESNNGPPGNSGSGDASGSGSGSANRVDQNKTSQREAALTKFRQKRKERKERCFHKKVRYQSRKKLAEQRPRFRGQFIRQSSNEKTSEATTER* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00883 744 MobiDBLite consensus disorder prediction 474 497 - -
Lapu7g00883 744 MobiDBLite consensus disorder prediction 376 400 - -
Lapu7g00883 744 MobiDBLite consensus disorder prediction 696 714 - -
Lapu7g00883 744 MobiDBLite consensus disorder prediction 211 228 - -
Lapu7g00883 744 MobiDBLite consensus disorder prediction 626 688 - -
Lapu7g00883 744 SMART REC_2 87 202 IPR001789 GO:0000160
Lapu7g00883 744 ProSiteProfiles CCT domain profile. 689 731 IPR010402 GO:0005515
Lapu7g00883 744 PANTHER TWO-COMPONENT RESPONSE REGULATOR 87 376 IPR045279 GO:0009736
Lapu7g00883 744 CDD psREC_PRR 89 192 - -
Lapu7g00883 744 MobiDBLite consensus disorder prediction 317 346 - -
Lapu7g00883 744 FunFam Two-component response regulator-like PRR37 87 245 - -
Lapu7g00883 744 Pfam Response regulator receiver domain 89 200 IPR001789 GO:0000160
Lapu7g00883 744 Gene3D - 86 243 - -
Lapu7g00883 744 MobiDBLite consensus disorder prediction 211 286 - -
Lapu7g00883 744 MobiDBLite consensus disorder prediction 242 272 - -
Lapu7g00883 744 MobiDBLite consensus disorder prediction 366 400 - -
Lapu7g00883 744 MobiDBLite consensus disorder prediction 438 497 - -
Lapu7g00883 744 ProSiteProfiles Response regulatory domain profile. 88 206 IPR001789 GO:0000160
Lapu7g00883 744 SUPERFAMILY CheY-like 85 211 IPR011006 -
Lapu7g00883 744 Pfam CCT motif 686 731 IPR010402 GO:0005515
Lapu7g00883 744 MobiDBLite consensus disorder prediction 438 464 - -
Lapu7g00883 744 MobiDBLite consensus disorder prediction 626 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00883 Lapu-Chr7 10615733 10632639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00883 163 733 Response Regulator Gene Family AT5G02810 46.388 2.12e-112 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lapu7g00883 Response_reg 5.4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00883 K12129 - gmx:100796933 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00883 7 10615733 10632639 Lapu7g00883 7 10615733 10632639 ECH