Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00878 ATGGCAACTCTTGGCGTGCAAGCAGTTCGTCCTCCTCCATTAACATCCACCTCCGACCCACCTTCTCTTTTTGATGGCACCACCAGGTTGTACATCAGTTATTCTTGCCCCTATGCACAACGTGTATGGATTACTAGGAACTACAAGAGACTACAAGACAACATCAAATTGGTCCCTATTGATCTTCAAGATAGGCCTGCTTGGTACAAGGAGAAAGTCTACCCTGAAAACAAGGTGCCATCCTTGGAGCACAATGGCAAGGTATTGGGAGAAAGTCTTGATTTGATCAAATATGTAGATGCCAACTTTGAAGGGACACCTTTGTTTCCTAGTGATCCTGCCAAGAAAGAGTTCGGTGAACACCTAATATCCCATGTTGATACTTTCAACGAAGACATGTACTCTTCATTGAAAGGGGGTACTTTCCAGCAAGCCAGTCCTGCCCTTGAGTACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGTCATTCTTTCTTGGTCAATTCAGTTTGGTGGATATTGCCTATATTCCATTTGTTGAAAGATTCCAACCTGTCTTTGTTGATGTGTTCAAACATGGCATCACCGAAGGAAGGCCAAAACTTGCAACATGGATTGAGGAGGTGAACAAGATTGATGCTTATACGCAAACAAAAGTCGATCCCCAGGAAATCGTTGATAGATTCAAGAAACGATATCTGTCTCAACAGTGA 714 0.43 MATLGVQAVRPPPLTSTSDPPSLFDGTTRLYISYSCPYAQRVWITRNYKRLQDNIKLVPIDLQDRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGTPLFPSDPAKKEFGEHLISHVDTFNEDMYSSLKGGTFQQASPALEYLENALGKFDDGSFFLGQFSLVDIAYIPFVERFQPVFVDVFKHGITEGRPKLATWIEEVNKIDAYTQTKVDPQEIVDRFKKRYLSQQ* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00878 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Lapu7g00878 237 Gene3D Glutaredoxin 1 104 - -
Lapu7g00878 237 SUPERFAMILY Thioredoxin-like 23 108 IPR036249 -
Lapu7g00878 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 233 IPR044629 GO:0004364
Lapu7g00878 237 MobiDBLite consensus disorder prediction 1 21 - -
Lapu7g00878 237 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Lapu7g00878 237 PRINTS Omega-class glutathione S-transferase signature 103 117 IPR005442 GO:0004364|GO:0005737
Lapu7g00878 237 PRINTS Omega-class glutathione S-transferase signature 163 182 IPR005442 GO:0004364|GO:0005737
Lapu7g00878 237 PRINTS Omega-class glutathione S-transferase signature 26 41 IPR005442 GO:0004364|GO:0005737
Lapu7g00878 237 CDD GST_C_Lambda 112 230 - -
Lapu7g00878 237 FunFam Lambda class glutathione S-transferase 105 236 - -
Lapu7g00878 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Lapu7g00878 237 SFLD Main (cytGST) 29 210 - -
Lapu7g00878 237 SUPERFAMILY GST C-terminal domain-like 103 232 IPR036282 -
Lapu7g00878 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Lapu7g00878 237 Gene3D - 105 237 - -
Lapu7g00878 237 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00878 Lapu-Chr7 10569917 10572813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00878 10 234 Glutathione S-transferase Gene Family AT5G02790 68.889 1.01e-116 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00878 K00799 - gmx:100775492 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00472 6 4920322 4923136 Lapu7g00878 7 10569917 10572813 ECH
Lapu7g00878 7 10569917 10572813 Lapu7g00878 7 10569917 10572813 ECH
Lapu6g00472 6 4920322 4923136 Lapu7g00878 7 10569917 10572813 PCT