Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00853 ATGAAGAAGAAATCAGATGCGGAAAACGACTACAACGAATTTAAGAGCAATGAAGATAAAGATGATAGTCAATACAAAAAGGAAGAGAAGAAGAGGGAGAAGAAAAAACTGAGGAAAGAAGGCAAAAGTAAGGAGTATAATGAATTTGAGAGCAATGAAGGTGAAGGTGAAGGTGATGCCCAAAGTAAGAAGAGGAAGAAGAAAAAATTGAGTGTAGAAAGCAAAAGTAAGGAGTATAAAGTCTTTGAAAGGAATGAAGGTGAAGGTGACGTCGAAGGTAAGAAGAGGGAGAAGAAAAAACTGAGTGAAGAAGGCAAAAGTAAGGATTATAATGAGTTTGAAAACAATGAAGGTGAAGATGATGGCCAAGGTAGGAAGAGGAAGAAGAAAAAACTGAGTAAAGAAAGCAAAAGTAAGGAGTATAGTATCTTTGAAAGGAATGAAGGTGAAGATGATGTCGAAGGTAAGAAGAGGAAAAAGAAAAAACTGAATGAAGAAGGTAAAAGTAAGGAGTATAACGAGTTTGAAAACAATGAAGTTGAAGATGATGGCCAAGGTAAGAAGAAAAGATTGAGTGAAGAAAGCAAAAGTAAGGAGTATAATGTCTTTGAAAGGAATGGAGGTGAAGATTATATTGAAGGGAAGAAGAGGAAGAAGAAAAAACTGAGTGAAGAAGGCAAAATTAAGGAGTATAATGAGTTTGAAAACAATGAAGGTGAAAATGATGCCCAAGGTAAGAAGCGGAAGAAGAAAAAATTGAGTAAAGAAAGCAAAAGTAAGGAATATAATGTTTTTGAAAGGATTGAAGGTGAAGATGATGTAGAAGGTAAGAAGAAAAAAATGAGTGAAGAAAGCAAAAGCAAGGACGAAAAGATTATGGCAAAGAAGAAAGCCAAGGCAGATAATGGTGAATCTCCTAATCCTGCACAATCCAAACCCAAACGGGTAACTTTTTCTGATCAAGTGGATGTCTGTTGTGATGGCTTAGTCCGTGGGAAAAGGTTTACACCAGAAGAAGATGAGAAGATTAAATTGGCTGTTTTTGATTATATTGAGTCTCATGGTTTGGGAGATGAAGGTCTAGATATGGTTCTCCATTGCATCTCTCATCCGGAAGTTAGAACTTGTTGGAAGGAAATTGCAGCAGCCTTACCTCACAGGCCACATACCAGTGTGTATACTCGTGCCCATATTTTGTTTGAAAGGGGTGAGCAGCGAAAGTGGACACCTGAAGAGTATGAGTTTTTACGGAAGGTCCAGGAACAACATGGATCTGATTGGAGATCTGTAGCTGATGCATTGGGCAAAAATCGAATTCATGTAAAGGATGCATGGCGTAGAATGAAATTAAGAAATAGAAATAGTGGACGATGGACCCAGGAGGAGTATCAAAATTTATTCAATTTAGTAAACCTGGACCTACGTGTGAGAGCTTCACAGGGTTATAGAAAATCAAAACATGGTATGTTGCGAGATAATATTGGTTGGGAGGCAATTGGTGACAAGTTGATCACTAGAAACAGCGTGAGCTGCTGCCAAAAGTGGTATGATAAATTAACATCCCCTATGGTTGCTAGTGGTTCATGGAGTGATACTGATGACTATCGCCTGGTCAATGCTTTATTTAATTTGGATGCGTGCTGCATGGAGGAGGTGGATTGGGACAATCTGCTTGAGCACAGGCCTGGTGATATATGTAGAAAAAGGTGGAACCAAATGGTCCAATATATTGGAGAGCATGGGGGGAAGCCATTTGCTGAGCAGGTTGAAATTCTTGCAAAAAGATTTTGCCCCGATTTATTGGAAGTAAGAGAGGCCTTTGAAGCAAAACCTGTGGTTTGCTGA 1845 0.3875 MKKKSDAENDYNEFKSNEDKDDSQYKKEEKKREKKKLRKEGKSKEYNEFESNEGEGEGDAQSKKRKKKKLSVESKSKEYKVFERNEGEGDVEGKKREKKKLSEEGKSKDYNEFENNEGEDDGQGRKRKKKKLSKESKSKEYSIFERNEGEDDVEGKKRKKKKLNEEGKSKEYNEFENNEVEDDGQGKKKRLSEESKSKEYNVFERNGGEDYIEGKKRKKKKLSEEGKIKEYNEFENNEGENDAQGKKRKKKKLSKESKSKEYNVFERIEGEDDVEGKKKKMSEESKSKDEKIMAKKKAKADNGESPNPAQSKPKRVTFSDQVDVCCDGLVRGKRFTPEEDEKIKLAVFDYIESHGLGDEGLDMVLHCISHPEVRTCWKEIAAALPHRPHTSVYTRAHILFERGEQRKWTPEEYEFLRKVQEQHGSDWRSVADALGKNRIHVKDAWRRMKLRNRNSGRWTQEEYQNLFNLVNLDLRVRASQGYRKSKHGMLRDNIGWEAIGDKLITRNSVSCCQKWYDKLTSPMVASGSWSDTDDYRLVNALFNLDACCMEEVDWDNLLEHRPGDICRKRWNQMVQYIGEHGGKPFAEQVEILAKRFCPDLLEVREAFEAKPVVC* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00853 614 Coils Coil 20 47 - -
Lapu7g00853 614 ProSiteProfiles Myb-like domain profile. 521 574 IPR001005 -
Lapu7g00853 614 SUPERFAMILY Homeodomain-like 499 577 IPR009057 -
Lapu7g00853 614 MobiDBLite consensus disorder prediction 1 315 - -
Lapu7g00853 614 Coils Coil 84 104 - -
Lapu7g00853 614 Pfam Myb-like DNA-binding domain 408 466 - -
Lapu7g00853 614 Gene3D - 448 523 - -
Lapu7g00853 614 SMART sant 454 521 IPR001005 -
Lapu7g00853 614 SMART sant 331 402 IPR001005 -
Lapu7g00853 614 SMART sant 404 451 IPR001005 -
Lapu7g00853 614 Gene3D - 409 447 - -
Lapu7g00853 614 SUPERFAMILY Homeodomain-like 406 466 IPR009057 -
Lapu7g00853 614 ProSiteProfiles Myb-like domain profile. 450 519 IPR001005 -
Lapu7g00853 614 ProSiteProfiles Myb-like domain profile. 407 449 IPR001005 -
Lapu7g00853 614 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 406 453 IPR017930 -
Lapu7g00853 614 CDD SANT 407 449 IPR001005 -
Lapu7g00853 614 Coils Coil 236 256 - -
Lapu7g00853 614 MobiDBLite consensus disorder prediction 256 302 - -
Lapu7g00853 614 PANTHER GB|AAC33480.1 6 613 - -
Lapu7g00853 614 MobiDBLite consensus disorder prediction 39 126 - -
Lapu7g00853 614 Coils Coil 146 166 - -
Lapu7g00853 614 MobiDBLite consensus disorder prediction 1 30 - -
Lapu7g00853 614 MobiDBLite consensus disorder prediction 135 247 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu7g00853 Myb_DNA-bind_6 1.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00853 - - var:108338141 784.252