Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00851 ATGGCTGCCACCACCAATCCTGTAGTAGGTTCCCATGTTTGGGTGGAGGATTCTCAAGTAGCCTGGATAGATGGTGAGGTCTTGGAGGTTAAGGGAGGAGAAATCAAAGTCCTTTGCACTTCAGGGAAGACGGTTGTTGTTAAACCTTCTAGTGTTTATCATAAAGATACTGAAGCCCCACCATGTGGAGTGGATGATATGACAAAACTTGCATATCTACACGAACCTGGTGTCCTGGATAATCTGAGATCAAGATATGATATTAATGAAATTTATACCTACACTGGGAATATATTGATTGCTGTGAATCCTTTCATAAAGCTTCCTCATTTGTATGATAGCCATATGATGGCACAATATAAAGGAGCAGGTTTTGGTGAGCTAAGTCCACATCCTTTTGCTGTTGCAGATGCAGCGTATAGACTTATGATTAATGAGGGAATCAGCCAATCAATATTGGTTAGTGGTGAAAGTGGGGCTGGGAAAACAGAAAGCACGAAGTTACTCATGCGCTATCTTGCTTACATGGGAGGGAGAGCCAATAATGCTGCCGAAGGTAGAACAGTTGAGCAGAAAGTTCTCGAGTCCAATCCTGTTCTAGAGGCCTTTGGCAATGCAAAGACTGTTAGAAACAATAATTCTAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAGGGGAAGAATTTCTGGGGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGCCAGGTGTCAGATCCAGAGAGGAACTATCACTGTTTCTATATGCTCTGTGCTGCACCTCCTGAGGATATTCAGAAGTTCAAATTAGGAAATCCTAGAGAATTTCATTATCTGAATCAAACAAATTGCTTTGAGTTGGAAGGGGTTGATGAGTTAAAAGAATACCGTGATACGAGGAGAGCAATGGATGTTGTTGGAATAAGTTCTGAGGAGCAGGAAGCAATATTTCGAGTGGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTTCAAAAGGGAAAGAAATGGACTCAAGTGTACCCAAAGATGAAAAATCTTGGTTCCATCTACATACTGCTTCCGAACTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAGCGTGTAATTGTTACTCGTGATGAAACTATAACAAAATGGCTGGATCCCGAATCTGCTGCACTCAGCCGAGACGCTTTGGCTAAGATTGTGTACACGAGGTTGTTTGATTGGCTGGTGGATAAAATTAATAACTCAATTGGACAAGACCCTGATTCGAAGTCCTTAATTGGCGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTCGAGCAATTTTGCATCAATTTGACTAATGAAAAACTTCAGCAACATTTTAATCAGCATGTATTCAAAATGGAGCAAGAAGAGTACAAAAAAGAGGAGATTGATTGGAGTTACATCGAGTTTGTTGATAATCAAGATATTCTAGATCTCATTGAAAAGAAACCTGGAGGCATTATTGCTCTTCTTGATGAGGCTTGTATGTTTCCTAGATCAACACATGAAACTTTTGCCCAAAAGCTGTATCAGACATTCAAAAACCATAAAAGGTTCAGCAAGCCCAAATTGGCTCGTAGTGACTTCACAATTTGCCATTATGCGGGTGATGTCACTTATCAAACTGAGTTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCAGAACACCAGGCACTTCTTTATGCTTCCAAATGCCCCTTTGTGTCTGGATTGTTCCCTCCTTCACCTGAGGAATCATCCAAACAATCAAAGTTTTCTTCAATAGGTTCCCGGTTTAAGCAACAATTGCAAGCACTGCTTGAAACTCTCAGTGCCACTGAGCCTCATTACATTCGTTGTGTTAAACCCAATAATCTTCTTAAGCCAGCAATTTTTGAGAATAAAAATGTTTTGCAGCAATTGCGATGTGGGGGAGTTATGGAGGCAATTAGGATAAGTTGTGCTGGTTATCCAACTAGGAAAACATTTGATGAATTTGCAGATCGATTTGGACTTCTTGCACCTGAAGCTATGGACGGGAGTTCTGATGAGGTCACTGCTTGCAAAAGGATTCTGGAGAAGGTTGGACTTAAGGGCTATCAGATTGGTAAAACAAAAGTGTTTCTTCGAGCTGGTCAAATGGCAGATCTAGATACCCGTAGAAGTGAGGTCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAGAGTTCGCACCTTTTTGGCCTCCCGAAGTTTTGTCTTAATACGTTTGTCTGCTATAAAGATTCAAGCTGCATGCAGAGGACAACTTGCTAGGCAAGTTTATGAAGGATTGCGATGGGAGGCTTCTAGTCTGATGATTCAGAGATTTTTCCGCATGCATGTTGCCAGGAAGGCATATAAAGCAACGTATAACTCGGCTGTTTCTCTTCAAACTGGTATGCGAGGGATGGCTGCTCGTAGTGAGTTGCGCTTCAGGAAGCGAACTAGGGCTGCTATTGTCATTCAGAGCCACTGCAGGAAATACCTTGCACTCCATCGTTTTACAAACTTAAAGAAGGCAGCAATTACAACACAATGTGCATGGAGAGGAAAAGTTGCACGACAAGAATTACGAAAGCTCAAGATGGCTGCAAGAGAAACTGGAGCTCTACAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGGTTGCAGCTAGAAAAACGCTTGAGGATTGACATTGAAGAATCAAAAGCACAAGAAAATGAAAAGTTACAATCTGCTTTGCAAGAGATGCAACTTCAGTTTAAAGAGACCAAGTTATTACTTCAAAAGGAGCGACAGGCTGCAAAAAGAGAAGCTGAGAGAGCACCTGTCATACAAGAGGTTCCTGTTGTTGACCATGCTCTGATGGAGAAGCTAACTAGTGAAAATGAGAAACTCAAGACCCTAGTGAGTTCATTGGAAGAGAAAATTGATGAAACTGAAAAAAGATATGAAGAGGCAAACAAAATTAGTGAAGAAAGGTTGAAGCAGACTTTGGATGCTGAATCAAAAATAATCCAGTTGAAGACAGCTATGCAAAGGCTCGAAGAGAAATTTTCAGATATGGAATCCGAAAACCAGGTTCTGCGGCAACAGTCTCTGCTGACAAAAACAATGTCAGAACAACTTTCTACCCACATATCTGAGAAATTGGAAAATGGTCACCATGTGGGTGAAGATCATAAAACTTCTGAAGCACAGAGTGTCACACCTGTGAAGAAGTTTGGTACAGAATCTGATGGAAAATTGAGGAGATCCTTCATTGAGCGTCAACATGAGAATGTTGATGCACTAGTGAACTGTGTTACGAAAAATATTGGTTTCCATCACGGAAAGCCTGTTGCTGCATTTACCATTTATAAATGTCTCCTTCAATGGAAATCATTTGAGGCTGAAAGAACAAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCTTCAATTGAGAATCAAGATGACAATGATCTTATGGCATATTGGCTGTCAAATATGTCTGCACTATTGTTTTTGCTCCAGCAAAGTCTGAAATCTGGTGGTTCAGCTGATGCAACTCCTGTAAAAAAACCACCAAATCCAACGTCCCTCTTTGGGAGAATGACTATGGGTTTTCGCTCATCTCCTTCTTCTGCCAGCCTTCCTACCCCCCCATCAGAAGTTGTACGCAAGGTAGAAGCTAAATATCCTGCTTTGCTTTTCAAGCAACAGCTCACAGCCTATGTGGAGAAAATATATGGAATCCTTCGGGACAACTTGAAGAAAGAATTGGCATCATTGCTTTCTTTATGTATCCAGGCACCAAGAACATCAAAGGGAGTGTTACGATCTGGCCGATCCTTTGGTAAAGATTCTCCTATGGGTCACTGGCAGAGTATTATAGAATCCCTGAATACTCTCCTCTGTACTCTGAAAGAAAACTTTGTACCCCCAGTCCTTGTCCAAAAGATCTTCACTCAAACATTCTCATACATTAATGTTCAACTCTTTAATAGTCTTCTTCTGCGTCGTGATTGTTGCACATTTAGCAATGGGGAATATGTGAAAGCTGGTTTAGCAGAATTGGAGTTGTGGTGCTGCCAAGCAAAAGAGGAGTATGCAGGCTCATCTTGGGATGAGCTTAAGCACATTAGACAAGCTGTTGGTTTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAGATCATTAATGATTTATGCCCCATCATGAGTGTCCAGCAGCTGTACAGAATATGTACACTTTACTGGGATGCTAACTACAATACTCGAAGTGTATCTCCAGATGTCCTTTCAAGCATGAGAGTGCTTATGGCTGAGGACTCTAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGCATCCCCTTCTCAGTAGATGACCTCTCTACATCACTGCAAGAGAAGGATTTCTCAGACATGAAACCAGCTGATGAGCTGCTTGAGAATCCCGCCTTCCAATTTTTAAATGAGTAG 4536 0.4107 MAATTNPVVGSHVWVEDSQVAWIDGEVLEVKGGEIKVLCTSGKTVVVKPSSVYHKDTEAPPCGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAGFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRANNAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDIQKFKLGNPREFHYLNQTNCFELEGVDELKEYRDTRRAMDVVGISSEEQEAIFRVVAAILHLGNIEFSKGKEMDSSVPKDEKSWFHLHTASELFMCDAKALEDSLCKRVIVTRDETITKWLDPESAALSRDALAKIVYTRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFADRFGLLAPEAMDGSSDEVTACKRILEKVGLKGYQIGKTKVFLRAGQMADLDTRRSEVLGKSASIIQRRVRTFLASRSFVLIRLSAIKIQAACRGQLARQVYEGLRWEASSLMIQRFFRMHVARKAYKATYNSAVSLQTGMRGMAARSELRFRKRTRAAIVIQSHCRKYLALHRFTNLKKAAITTQCAWRGKVARQELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRIDIEESKAQENEKLQSALQEMQLQFKETKLLLQKERQAAKREAERAPVIQEVPVVDHALMEKLTSENEKLKTLVSSLEEKIDETEKRYEEANKISEERLKQTLDAESKIIQLKTAMQRLEEKFSDMESENQVLRQQSLLTKTMSEQLSTHISEKLENGHHVGEDHKTSEAQSVTPVKKFGTESDGKLRRSFIERQHENVDALVNCVTKNIGFHHGKPVAAFTIYKCLLQWKSFEAERTSVFDRLIQMIGSSIENQDDNDLMAYWLSNMSALLFLLQQSLKSGGSADATPVKKPPNPTSLFGRMTMGFRSSPSSASLPTPPSEVVRKVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELASLLSLCIQAPRTSKGVLRSGRSFGKDSPMGHWQSIIESLNTLLCTLKENFVPPVLVQKIFTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMAEDSNNAQSDSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKPADELLENPAFQFLNE* 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00851 1511 Gene3D Myosin VI head, motor domain, U50 subdomain 314 603 - -
Lapu7g00851 1511 Pfam DIL domain 1333 1436 IPR002710 -
Lapu7g00851 1511 ProSiteProfiles Dilute domain profile. 1156 1457 IPR002710 -
Lapu7g00851 1511 Coils Coil 879 952 - -
Lapu7g00851 1511 Pfam Myosin head (motor domain) 64 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g00851 1511 ProSiteProfiles IQ motif profile. 786 814 IPR000048 GO:0005515
Lapu7g00851 1511 Gene3D - 668 735 - -
Lapu7g00851 1511 ProSiteProfiles IQ motif profile. 810 837 IPR000048 GO:0005515
Lapu7g00851 1511 FunFam unconventional myosin-Va 836 883 - -
Lapu7g00851 1511 CDD MyosinXI_CBD 1107 1480 IPR037975 GO:0007015
Lapu7g00851 1511 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Lapu7g00851 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 787 IPR027417 -
Lapu7g00851 1511 ProSiteProfiles IQ motif profile. 833 862 IPR000048 GO:0005515
Lapu7g00851 1511 SMART iq_5 736 758 IPR000048 GO:0005515
Lapu7g00851 1511 SMART iq_5 759 781 IPR000048 GO:0005515
Lapu7g00851 1511 SMART iq_5 784 806 IPR000048 GO:0005515
Lapu7g00851 1511 SMART iq_5 832 854 IPR000048 GO:0005515
Lapu7g00851 1511 SMART iq_5 807 829 IPR000048 GO:0005515
Lapu7g00851 1511 SMART iq_5 855 877 IPR000048 GO:0005515
Lapu7g00851 1511 FunFam Class V myosin 441 583 - -
Lapu7g00851 1511 Gene3D - 441 625 - -
Lapu7g00851 1511 ProSiteProfiles Myosin motor domain profile. 62 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g00851 1511 CDD MYSc_Myo11 76 722 IPR036018 -
Lapu7g00851 1511 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Lapu7g00851 1511 Gene3D Kinesin motor domain 65 664 IPR036961 -
Lapu7g00851 1511 PANTHER MYOSIN 829 1445 - -
Lapu7g00851 1511 Gene3D - 254 312 - -
Lapu7g00851 1511 SMART MYSc_2a 57 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g00851 1511 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lapu7g00851 1511 Coils Coil 974 1050 - -
Lapu7g00851 1511 FunFam Myosin heavy chain 254 309 - -
Lapu7g00851 1511 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g00851 1511 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g00851 1511 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g00851 1511 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g00851 1511 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu7g00851 1511 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lapu7g00851 1511 SMART DIL_2 1332 1439 IPR002710 -
Lapu7g00851 1511 FunFam Myosin 2 314 427 - -
Lapu7g00851 1511 FunFam unconventional myosin-Va 787 835 - -
Lapu7g00851 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 790 885 IPR027417 -
Lapu7g00851 1511 Pfam IQ calmodulin-binding motif 858 877 IPR000048 GO:0005515
Lapu7g00851 1511 Pfam IQ calmodulin-binding motif 788 806 IPR000048 GO:0005515
Lapu7g00851 1511 Pfam IQ calmodulin-binding motif 834 853 IPR000048 GO:0005515
Lapu7g00851 1511 Pfam IQ calmodulin-binding motif 763 780 IPR000048 GO:0005515
Lapu7g00851 1511 Gene3D - 836 884 - -
Lapu7g00851 1511 Gene3D - 736 785 - -
Lapu7g00851 1511 Gene3D - 786 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00851 Lapu-Chr7 10163055 10183661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00851 1 1510 Myosins gene family AT5G43900 75.280 0.0 2356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00851 K10357 - gmx:100791070 2828.12