LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu7g00828	ATGGCGGCGTCGCGGCGGCTCCGGGACCTCCAATCGCAGGCGGCGAACAAGATCTGCGTGGACTGCTCTCAGAAGAACCCGCAGTGGGCCTCCGTCTCGTACGGCGTCTTCATGTGTCTGGAGTGCTCCGGCAAGCACCGTGGTCTGGGCGTCCACATCTCCTTCGTCCGATCCGTCACCATGGACTCCTGGTCCGAAGTCCAGATCAAGAAAATGGAAGCCGGTGGCAACGATAAGCTCAACGCCTTCCTCGCGCAGTACTCCATCCCCAAGGAGACAGACATCGTCACTAAATACAACACCAACGCCGCCGCGGTCTACCGCGACCGGATCCAGGCCATCGCCGACGGTCGTCCCTGGCGCGATCCGCCGGTAGTGAAGGAAAACCTGGCCGCAGGCAAGGGGAGGCCGCCGCTGACGCAGACGCGAAGAGCTAGCGAGGGAGGATGGGACGATTGGGACAACGAGGGGAGTTCGGCGGACTTCCGAAGCAGGTCAACCGGGGACTTCAGGAGCTTGAACGGCGGCGGCGCGCCGGCGAGGTCGAGGTCAACCGATGACATCTCGCGGTCGCAGCTGGAGGCGTCGGCGGCGAACAAGGAAAGCTTTTTCGCGAGGAAGATGGCGGAGAACGAGTCGCGGCCTGAGGGGCTTCCGCCGTCGCAGGGAGGGAAGTACGTAGGGTTCGGATCCAGTCCACCGCCTCAGCGGAGGAACGATGCTCAAAGCGATTATTTATCTGTCGTTTCGCAGGGGATTGGGAAATTGTCTTTGGTTGCCGCCTCTGCTGCTCAGTCTGCGGCTAATGTTGTTCAGGCTGGCACGAAAGAGATCACTTCTAAGGTCAAGGAAGGTGGTTACGATCACAAGGTCAATGAAACTGTCACTGTTGTCACTCAAAAGACATCAGAGATTGGACAGAGGACTTGGGGCATAATGAAAGGAGTTATGGCCATGGCTTCCCAGAAGATTGAGGAGTACACTAGAGATGATCCAAACTGGAAGACTGATAACTGGCAACGAAATGAGAGTGATAGAAATGGTTATTATCAGGATTTTGACAAACAGAACCAAGGCTCAAATTCTTCTCTTGGAAGAGAACAATCTTCATCAGCGCAATATAAAACTCATAGTTCAAGCTCTTTGGATGATTGGAACCACCAAGATAGCAGGAAGGAAGAACCAGCTAAAGGATCAAGTCCTCATTTGTCGGGTGGACAGTCTAGTACCTACAACTCAAGCTCTTGGGATGATTGGGAACACACAGATTCTAGGAAGCAAGAACCAGCTAATGGATCAGCTCCCCATAATAATGATGATTGGGCTGGCTGGGATAATGCCAAAGATGATGATGGATTTGTTAATTTTTACCACGGTGCATCTAATAAGAGAGGTGTTGGTCATAATGGAAAATCAGATGGCACTTGGACAGAGGGAGGCTTTCTCTAA	1449	0.5355	MAASRRLRDLQSQAANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEVQIKKMEAGGNDKLNAFLAQYSIPKETDIVTKYNTNAAAVYRDRIQAIADGRPWRDPPVVKENLAAGKGRPPLTQTRRASEGGWDDWDNEGSSADFRSRSTGDFRSLNGGGAPARSRSTDDISRSQLEASAANKESFFARKMAENESRPEGLPPSQGGKYVGFGSSPPPQRRNDAQSDYLSVVSQGIGKLSLVAASAAQSAANVVQAGTKEITSKVKEGGYDHKVNETVTVVTQKTSEIGQRTWGIMKGVMAMASQKIEEYTRDDPNWKTDNWQRNESDRNGYYQDFDKQNQGSNSSLGREQSSSAQYKTHSSSSLDDWNHQDSRKEEPAKGSSPHLSGGQSSTYNSSSWDDWEHTDSRKQEPANGSAPHNNDDWAGWDNAKDDDGFVNFYHGASNKRGVGHNGKSDGTWTEGGFL*	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu7g00828	482	MobiDBLite	consensus disorder prediction	329	482	-	-
	Lapu7g00828	482	PANTHER	ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED	1	398	IPR044519	GO:0005096\|GO:0016192
	Lapu7g00828	482	FunFam	ADP-ribosylation factor GTPase-activating protein	1	129	-	-
	Lapu7g00828	482	PRINTS	HIV Rev interacting protein signature	16	35	IPR001164	GO:0005096
	Lapu7g00828	482	PRINTS	HIV Rev interacting protein signature	35	52	IPR001164	GO:0005096
	Lapu7g00828	482	PRINTS	HIV Rev interacting protein signature	56	77	IPR001164	GO:0005096
	Lapu7g00828	482	Pfam	Putative GTPase activating protein for Arf	5	105	IPR001164	GO:0005096
	Lapu7g00828	482	SMART	arf_gap_3	1	120	IPR001164	GO:0005096
	Lapu7g00828	482	MobiDBLite	consensus disorder prediction	184	198	-	-
	Lapu7g00828	482	MobiDBLite	consensus disorder prediction	351	381	-	-
	Lapu7g00828	482	MobiDBLite	consensus disorder prediction	401	417	-	-
	Lapu7g00828	482	MobiDBLite	consensus disorder prediction	329	350	-	-
	Lapu7g00828	482	CDD	ArfGap_ArfGap1	3	117	-	-
	Lapu7g00828	482	SUPERFAMILY	ArfGap/RecO-like zinc finger	5	111	IPR037278	-
	Lapu7g00828	482	Gene3D	Arf GTPase activating protein	1	123	IPR038508	-
	Lapu7g00828	482	MobiDBLite	consensus disorder prediction	118	242	-	-
	Lapu7g00828	482	MobiDBLite	consensus disorder prediction	382	398	-	-
	Lapu7g00828	482	ProSiteProfiles	ARF GTPase-activating proteins domain profile.	4	110	IPR001164	GO:0005096

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu7g00828	Lapu-Chr7	9847806	9853849	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu7g00828	5	91	C2H2 Transcription Factor Family	AT4G21160	48.864	3.30e-22	95.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu7g00828	K12492		-	gmx:100806519	825.469