Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00814 ATGAAAGAAGAGGACAAGTTTCTGAGATTGGGAAATAAGTCCAAAAAGCACCAGTGTTCCATTTGTGGTCAAGAATTCTCTCTGGGTCAGGCACTGGGAGGACACATGAAAAGGCACAGAATTGCCCTAAAGGAAGGGTTTTCTTCAATAAACCAGGTTATGGTAAAAGTCCCCAATAGTAGGAGGGTTATGTGCTTGGACTTGAACTTGACCCCTCTGCAGAATGACTTGAAGTTATTGTTTGGCGATAAAGCACCCAAAGTTGATTCCTTAGTCTGA 279 0.4265 MKEEDKFLRLGNKSKKHQCSICGQEFSLGQALGGHMKRHRIALKEGFSSINQVMVKVPNSRRVMCLDLNLTPLQNDLKLLFGDKAPKVDSLV* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00814 92 Pfam C2H2-type zinc finger 17 41 - -
Lapu7g00814 92 ProSitePatterns Zinc finger C2H2 type domain signature. 19 39 IPR013087 -
Lapu7g00814 92 Gene3D Classic Zinc Finger 4 61 - -
Lapu7g00814 92 PANTHER ZINC FINGER PROTEIN ZAT5 12 76 - -
Lapu7g00814 92 SUPERFAMILY beta-beta-alpha zinc fingers 14 40 IPR036236 -
Lapu7g00814 92 ProSiteProfiles Zinc finger C2H2 type domain profile. 17 39 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00814 Lapu-Chr7 9656952 9657389 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00814 17 89 C2H2 Transcription Factor Family AT2G37430 48.750 2.80e-21 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lapu7g00814 zf-C2H2_6 2.9e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00814 - - gmx:100793243 147.132