Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00806 ATGGCGCTGTGGATGGAAAAGGGTTCGGAGCCCTTGACCGAAAGCGAGAAGGCTGACCTTGAAGCCATTGCTGCACTCAAAGAGTCTGCTGCCTTTGAATTCAAGGAAAAGGGTAACCAATATGTGAAGATGGGTAAGAAGCATTACTCTGATGCTATTGATTGCTACACAAGGGCAATTGATCAGAAGGCCTTGAGTGACTCTGAGACCTCTATTCTTTTTTCAAATAGAGCCCATGTGAATTTGCTTCTAGGAAATCTTAGACGTGCTCTCATAGATTCTCAAGAGGCCCTCAAGTTGTGCGATTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCTTCACTTTCACTAAATATGTTGGCTGAAGCAAGAGAGTATTGTCTGAAGGGTCTTCAGTTGGACCCCAATAATGAGGATCTGAAGAAGCTTGACAGACAGATTGGTCTGAAGATATCAGAGAAGGAAAAGCACAAGGCTCAAGTCTCCAAGGCTACTGCAGAGGCAAAGGAACTTGTATCTGCAATTGAATATAGAGGCTTGAAAATCGGAAAGGCAATGTATAGAGAACTTACTGGATTAAGGAAACCTGTGTTGGATAAAAGTAATATCCTTCACTGGCCTGTTGTTCTTCTGTACGCAGAGGTTATGTCTAGTGACTTCATTGAGGATTTCTGCGAGACTGACATGTTTTCGGTTCACCTTGATATGATATTTGCAGAAGACCAGCCTTTGTCATGGGATGTTGAAAACAACTACAAACGTGAATTTATTGAATTATACTATGAGGCTGGTTCTGGACTTTGTCTATCAAAGGAAAAACTTCTTTGTTGTCTATTAGAAGGAACTGCAGCTTCTCACAGTGAACGTGTTGGTGATGAAGAGAAAGACGGAGTTGAGGATTATAAGCAACAAAAGGGTTCACCAGAATGGATCAAAGTGAATGAAAGGAGGACACTCCACGATGTTCTCAAAGAGCCTAATTTCATCATTCCTGGGATCCCAGTCCTCTATGTTCTTTCGAAGCGATCCAGCTTTTATAGCAAGTTCAAAGCTGGAAAATGGGCTCCTCCAAGTGTATGA 1083 0.4192 MALWMEKGSEPLTESEKADLEAIAALKESAAFEFKEKGNQYVKMGKKHYSDAIDCYTRAIDQKALSDSETSILFSNRAHVNLLLGNLRRALIDSQEALKLCDSNIKAIYRAAKASLSLNMLAEAREYCLKGLQLDPNNEDLKKLDRQIGLKISEKEKHKAQVSKATAEAKELVSAIEYRGLKIGKAMYRELTGLRKPVLDKSNILHWPVVLLYAEVMSSDFIEDFCETDMFSVHLDMIFAEDQPLSWDVENNYKREFIELYYEAGSGLCLSKEKLLCCLLEGTAASHSERVGDEEKDGVEDYKQQKGSPEWIKVNERRTLHDVLKEPNFIIPGIPVLYVLSKRSSFYSKFKAGKWAPPSV* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00806 360 CDD CTWD_Cns1-like 170 352 - -
Lapu7g00806 360 Coils Coil 155 175 - -
Lapu7g00806 360 SMART tpr_5 71 104 IPR019734 GO:0005515
Lapu7g00806 360 SMART tpr_5 31 66 IPR019734 GO:0005515
Lapu7g00806 360 SMART tpr_5 105 138 IPR019734 GO:0005515
Lapu7g00806 360 Pfam Cns1/TTC4 Wheel domain 201 267 IPR044059 GO:0051879
Lapu7g00806 360 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 14 357 - -
Lapu7g00806 360 SUPERFAMILY TPR-like 22 156 IPR011990 GO:0005515
Lapu7g00806 360 Gene3D Tetratricopeptide repeat domain 26 154 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00806 30 161 Calmodulin-binding Proteins AT3G25230 31.469 6.01e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00806 K24927 - gmx:100783179 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00806 7 9575462 9579398 Lapu7g00806 7 9575462 9579398 ECH