Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00796 ATGTCAACTGTGTCCAAAGATGACAACTTGGTGCTGTCTTCGGAGGACTCTTCTTGCCCAGAAGAGTCTGAGATCGAATTGGGTCTTGGATTGAGCATCTCTGGTCCTTCTAAGTCTCACCACCATGTCCACGTCCATGCTCATGCTCCTTCTCCTTATGCTAGGATTTTCACTGCTAAGGTTTTTCCTTCTTCAGCATCACCATCACCTTCCTCTTCTTCCTCTTCCTCTCCCAACATCACTGCTGGCACCAAGAGAGCTGCTGAATCTCTTGTTGCAAATAATCGTTCCAGTCAAGTAGTTGGATGGCCTCCACTTCGAACGTATAGAGTGAATAGCTACAATGTCCATGCAAAATCAACAGAAGTATTCGACTCTGTGACTGAGAAGAGTAAGGGCAATAATACTGTGGTAAGGAAGAGTGCTGACAATGGCAATGATAATAACATTAATGCCAAAGAAAAAAGACAGCTCAGGAGTTCCCTGTTCGTCAAGGTAAATATGGATGGTATACCTATTGGGAGGAAGGTTGATTTGAGCGCTCATAGTTCCTATGAAACCTTAGCCCAAACGTTGGAGGATATGTTTAATGAATCAACTACAGTCACCACTTGCAAAGGAGCAAATGGTGAGGATCATGGAATTATTATTGGAGGAGAAAGGCATTCAAAATTGTTGGATGGATCTTCCAAGTTTGTACTCACCTACGAAGACAAGGAAGGAGATTGGATGCTTGTTGGAGATGTTCCTTGGGGGATGTTCTTTAGCTCGGTGAGGAGACTAAGAATAATGAGAACATCTGAGGCTAATGGACTTGGTAAGCTAATGCATTATTATTCCAAATACAAGTTACGCTATATGTTTGTTTTGCTAATGTAG 879 0.4255 MSTVSKDDNLVLSSEDSSCPEESEIELGLGLSISGPSKSHHHVHVHAHAPSPYARIFTAKVFPSSASPSPSSSSSSSPNITAGTKRAAESLVANNRSSQVVGWPPLRTYRVNSYNVHAKSTEVFDSVTEKSKGNNTVVRKSADNGNDNNINAKEKRQLRSSLFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGANGEDHGIIIGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFFSSVRRLRIMRTSEANGLGKLMHYYSKYKLRYMFVLLM* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00796 292 Gene3D - 156 278 - -
Lapu7g00796 292 MobiDBLite consensus disorder prediction 1 18 - -
Lapu7g00796 292 FunFam Auxin-responsive protein 156 276 - -
Lapu7g00796 292 SUPERFAMILY CAD & PB1 domains 156 264 - -
Lapu7g00796 292 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 24 271 IPR003311 GO:0005634|GO:0006355
Lapu7g00796 292 Pfam AUX/IAA family 60 273 IPR033389 -
Lapu7g00796 292 ProSiteProfiles PB1 domain profile. 161 268 IPR000270 GO:0005515
Lapu7g00796 292 MobiDBLite consensus disorder prediction 64 85 - -
Lapu7g00796 292 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00796 Lapu-Chr7 9454572 9460439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00796 154 272 B3 DNA Binding Superfamily AT1G59750 34.454 7.19e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lapu7g00796 AUX_IAA 2.1e-60 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00796 K14484 - gmx:100779400 425.631