Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00792 ATGGCACCTAATAAAAGAGTGGGTGCGGCCTATCGTGCAATGGGAAGTCTTGGAATTGAGGAATCGAAAGTGAAATCAGCATTAAAGAAACTGCTCAAAGTGTTTGATAAAAACTGGGAGCTTATAGAGGCAGAGAACTATAGAGTTCTAGCAGATGCTATATTTGAGGATGACGATAATATGGTGCCCGAACTGAAAAAGAAAGTCCAGTCTGACGATGTACATAACACTCATCATTCTTTGCCTTCCTTTTCAAACAACCAGGAAGATGAGACAGAGTGTGAAGAGGCTCAGATGCTTATTGGAAGAGCTCAACCTTTAAAAAGGTTGCGATTAAGAGGTCAAGAGAGTCAGCCTTTGCATCCCCTGACTAACGGTGCCACCAGCCCTCCGTCAAAAAGGCCTAAATTAGAAGATAACGCATTACACGAGGGTTCTTCTGGGAAGAAACCTCAAAACAAGCCAGAGTCATCTGATGGGAATCCAAGGATTGAAGCACCGCCACTTTTACCTCGAGATGGCATTGTAGATAAGGGCAAGAAACATGCATCAACCCAAGTTTTTCAAAGTGGAAGAAAACTTGCATCTGAAAGATCGTCCCCATCCACACCATCTAAAGAACCGTCAGTTGAAGCAGGGAAATTTCTTTTGCCAAACAACAAAATGCCTCGTACTCACGCACTGATCATACCCAAGGATGAGCCTATTGATGAAGTGCCTGATTACGCAATGCCGATTGCAGTGATTCCTCCTGAACCATCAAGTGAGAGGGGCTCGTCATTGAAGAATGGTGGAAAACATGTTAGCCATGTTACTGAGACATCATCAGAATGCAGAGATCGAGTCACAGTTGAAGATGCTATTCCTACCTCAAACGAAGAAGCCACTTGTAATGTAGAGATAGCCTCATCAACTCTTGGAGAGGTAAAACTTTCTTTGAGCTGCAGCTCAGCTCTTTTGGGATCAGATTTTCACATGCCTAGTCGAGATGAACTTATAGAAATGATTGAGGATAAATGCCTGCGCTCATATAAAATTGCTGACCCAAATTTCTCTGTCATGAAACTTTTGAGGGATGTATGTGATTGCATGCTGGAATTCAGAAACAATTCTATTAATGACCCAGAAGAAGGTTCTATAATGAGATCCAATGTTGATGTGTCAAAGGAATCACAAGCACCTGGCATTCTGAGTGTGGTAAGAAATAAAGATTTGGACATGCTTTCTCATGTTTCAAATGGATCCATCAATGTTAATCCTTCTGCTGCTGCATTGGTTTCTCCCCGAAGTTTCCTTCCTCTCGCTCACCTGAATGGTCTGAGTGATTCTGTCATGGTTTCCAAGATGGACCAAACAAATGTTTTTTCACAAAGTAATGCTAGCAAGGAGCTGGAAGATACTATCTCTCCAAATTCACGTAGTTTAGTTATTGTTCCGCAGCATCAGCTGACAGTTGATGATATAAGGTCTTTTCATGATGTTAGTGACCTTACAAAAGGAGAAGAAAATGTTGAAATTCCTTGGGTGAATGAAACTACTAATGATTTCCCACCATCTTTTAACTACATACCCCAAAACCTTGTGTTCCAAGATGCTTACGTTAACATTTCTCTATCACGTCTTGGCCGTGAGGACTGTTGTTCAACTTGTATGGGCAATTGTATCTTGTCTGTACCCTGTGCCTGTGCAAATAAAACTGGGGGTGAATTTGCATATGGTCCTCAAGGCCGACTGAAGGAACAATTCTTGGAAGAGTGCATTGCCATTAGTCACAATCCTCAAAAACATTTCTTGTATTGCCAAAATTGCCCACTCGAAAGATCTAAGAATGATGGTGGTTTAGAGCCTTGTAAAGGACACTTAAAGAGGAAGTTTATTAAAGAATGCTGGAGCAAATGTGGCTGTGGCAAACAGTGTGGAAATCGGGTTATCCAGCGAGGAATAACTTGCAAACTCCAGGTGTTTTTCACTTCAGAAGGTAAAGGATGGGGTCTTCGTACCTTAGAGGACCTGCCTAAAGGTGCATTTGTGTGTGAGTTTGTTGGAGAAATTTTATCCATTAAAGAGTTGCACGGGAGGAATATGAAATGCACTGGAAAAGGGAAACATACATACCCAGTACTACTGGATGCAAATTGGGATTCAGGATATATGAGGGACAAAGAAGCTCTATGCTTGGATGCTGCTTCGTTTGGCAACATTGCTAGGTTTATCAATCACAGATGTTTTGATGCGAACTTGGTTGAGATCCCAGTTGAAGTTGAGGATCCTGGTCGTCATTACTATCATTTTGCTTTCTTCACTTCCAGAAAAGTTGCAGCACAGGAGGAGCTAACATGGGATTATGGTATTGACTTTGATGATCATGATCATCCTATCAAGCTGTTCCAGTGCAGATGTGGCAGTAAATTCTGCAGGCATATAAAGAGGTTAAACAGATCCAGTAGATCTGCATCAATTTCCGGATGA 2469 0.4176 MAPNKRVGAAYRAMGSLGIEESKVKSALKKLLKVFDKNWELIEAENYRVLADAIFEDDDNMVPELKKKVQSDDVHNTHHSLPSFSNNQEDETECEEAQMLIGRAQPLKRLRLRGQESQPLHPLTNGATSPPSKRPKLEDNALHEGSSGKKPQNKPESSDGNPRIEAPPLLPRDGIVDKGKKHASTQVFQSGRKLASERSSPSTPSKEPSVEAGKFLLPNNKMPRTHALIIPKDEPIDEVPDYAMPIAVIPPEPSSERGSSLKNGGKHVSHVTETSSECRDRVTVEDAIPTSNEEATCNVEIASSTLGEVKLSLSCSSALLGSDFHMPSRDELIEMIEDKCLRSYKIADPNFSVMKLLRDVCDCMLEFRNNSINDPEEGSIMRSNVDVSKESQAPGILSVVRNKDLDMLSHVSNGSINVNPSAAALVSPRSFLPLAHLNGLSDSVMVSKMDQTNVFSQSNASKELEDTISPNSRSLVIVPQHQLTVDDIRSFHDVSDLTKGEENVEIPWVNETTNDFPPSFNYIPQNLVFQDAYVNISLSRLGREDCCSTCMGNCILSVPCACANKTGGEFAYGPQGRLKEQFLEECIAISHNPQKHFLYCQNCPLERSKNDGGLEPCKGHLKRKFIKECWSKCGCGKQCGNRVIQRGITCKLQVFFTSEGKGWGLRTLEDLPKGAFVCEFVGEILSIKELHGRNMKCTGKGKHTYPVLLDANWDSGYMRDKEALCLDAASFGNIARFINHRCFDANLVEIPVEVEDPGRHYYHFAFFTSRKVAAQEELTWDYGIDFDDHDHPIKLFQCRCGSKFCRHIKRLNRSSRSASISG* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00792 822 MobiDBLite consensus disorder prediction 256 271 - -
Lapu7g00792 822 ProSiteProfiles Pre-SET domain profile. 546 647 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu7g00792 822 SMART preset_2 494 634 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu7g00792 822 MobiDBLite consensus disorder prediction 183 207 - -
Lapu7g00792 822 MobiDBLite consensus disorder prediction 253 281 - -
Lapu7g00792 822 Pfam Ubiquitin-binding WIYLD domain 4 60 IPR018848 -
Lapu7g00792 822 MobiDBLite consensus disorder prediction 115 214 - -
Lapu7g00792 822 SMART set_7 650 789 IPR001214 GO:0005515
Lapu7g00792 822 Gene3D - 1 60 IPR043017 -
Lapu7g00792 822 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 822 IPR025776 -
Lapu7g00792 822 Pfam SET domain 662 783 IPR001214 GO:0005515
Lapu7g00792 822 SUPERFAMILY SET domain 488 791 IPR046341 -
Lapu7g00792 822 MobiDBLite consensus disorder prediction 68 95 - -
Lapu7g00792 822 Gene3D SET domain 484 810 IPR046341 -
Lapu7g00792 822 ProSiteProfiles SET domain profile. 650 783 IPR001214 GO:0005515
Lapu7g00792 822 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 817 - -
Lapu7g00792 822 Pfam Pre-SET motif 498 642 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu7g00792 822 CDD SET_SETDB-like 518 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00792 Lapu-Chr7 9426077 9433606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00792 626 808 C2H2 Transcription Factor Family AT2G23740 40.741 9.50e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu7g00792 Pre-SET 3.2e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00792 7 9426077 9433606 Lapu7g00792 7 9426077 9433606 ECH
Lapu7g00792 7 9426077 9433606 Lapu6g00395 6 3964789 3969967 PCT