Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00789 ATGGAAGCACATCCTACTTTCTCCATTGAAAGATCAAATAAACTCAATAACATGGGGATGTCTGGAGCACTTTCTTCATCTTTGTCGGTCCTTCCAATACCCACAGAAGATATGTATCCCAGGCTGCCTGAGCCGCAGTTGGATATTGTAGAACAAGAGCTTATGACAAGACCTTTTACTCATTCAAGTTATTTGAATTCCAATGGAGTAGCTGGGCATATTTTTTCGTCTTCCCCTGGATATTCAACTGATCTTCATCGCTCATCTCTTTCATCTGATGAAAAACACTCTACTAATGCTCATTTTATTTCACAATCATCAACCAACATTGCCCAATTTCCATTATCATATTCTTCAAATACTGGACTACCAACTTCTGCAACACCAAGCCATTTTTCCAAACAAAACAGTGCTTCCTGGCATACAGATTCCCTGCCGAGCTTTCTAGATTTTCCTGCAAATGACTCAATTGATGATAATAGGATAGAAAGTAGAGCTTGCCCTATAATGGCATCCGAGGAGTATTGTAAGCAAAATGATTGGCAGGAGTGGGCTGAGCGGCTAATCAGTGATGATGACACTTTGACTTCTAATTGGGATGACCTTCTTACTGACAACATTCAAGATCTTCAGCCAAAGTTTCAATTCCAGGTTGCAAAACCACTTTCTCAGTTTCCAGGACATCAATCCCAAGGTCAACAACAACTTCCTGCTTCATATGGAGAAAATAGCACTGGAGCTACCCTCTCTTCCTCAGCAAATTCTGCTCCTGCCAAGTCACGAATGCGCTGGACACCAGAACTTCACGAGGCTTTTGTGGAGGCTGTCAACCAACTTGGGGGGAGTGAAAGAGCCACTCCAAAGGGTGTGTTAAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTGAAAAGCCATTTGCAGAAATACAGGACAGCTAGGTATAGGCCGGAGTCATCTGAAGGGGTGATGGAGAAAAAAGCAGGTTCCATTGAAGAGATGTCATCTCTAGATTTAAAAACGGGTATTGAGATCACTGAAGCTCTACGACTACAAATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTACCTCCAGATGATGTTTGAGAAGCAATGTAAATCTGGAACTGAAACGTTGAAGGCATCACCATCTACCATTGAGATTCCATCTGGAGTGTCATCAAATGGCAAGAGAGATTTCCCGGCCAAAAATGTTTTGGAAGCATCACAAGTGGACCATCGTAAGTCAGGACCTAATCAAGCTAACGGCAGTACCACAGTTGAGGAAGGCTCACTGGAAAAGGGTGGGAATCCTGATTCTCCCAAAACTCAACATGCTATTGCTAGTGATGATAGTGCACAAGCCCCAAAACGTCAAAGAACAGAGTAA 1440 0.4243 MEAHPTFSIERSNKLNNMGMSGALSSSLSVLPIPTEDMYPRLPEPQLDIVEQELMTRPFTHSSYLNSNGVAGHIFSSSPGYSTDLHRSSLSSDEKHSTNAHFISQSSTNIAQFPLSYSSNTGLPTSATPSHFSKQNSASWHTDSLPSFLDFPANDSIDDNRIESRACPIMASEEYCKQNDWQEWAERLISDDDTLTSNWDDLLTDNIQDLQPKFQFQVAKPLSQFPGHQSQGQQQLPASYGENSTGATLSSSANSAPAKSRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVMEKKAGSIEEMSSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGTETLKASPSTIEIPSGVSSNGKRDFPAKNVLEASQVDHRKSGPNQANGSTTVEEGSLEKGGNPDSPKTQHAIASDDSAQAPKRQRTE* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00789 479 MobiDBLite consensus disorder prediction 430 448 - -
Lapu7g00789 479 NCBIfam myb-like DNA-binding domain, SHAQKYF class 259 313 IPR006447 GO:0003677
Lapu7g00789 479 Coils Coil 347 367 - -
Lapu7g00789 479 MobiDBLite consensus disorder prediction 224 259 - -
Lapu7g00789 479 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 256 316 IPR017930 -
Lapu7g00789 479 MobiDBLite consensus disorder prediction 392 409 - -
Lapu7g00789 479 Pfam MYB-CC type transfactor, LHEQLE motif 344 391 IPR025756 -
Lapu7g00789 479 Gene3D - 258 317 - -
Lapu7g00789 479 MobiDBLite consensus disorder prediction 392 479 - -
Lapu7g00789 479 FunFam Myb family transcription factor 258 316 - -
Lapu7g00789 479 Pfam Myb-like DNA-binding domain 261 312 IPR001005 -
Lapu7g00789 479 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 231 461 IPR044848 GO:0003700
Lapu7g00789 479 MobiDBLite consensus disorder prediction 224 260 - -
Lapu7g00789 479 SUPERFAMILY Homeodomain-like 257 313 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00789 Lapu-Chr7 9402920 9413139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00789 32 388 G2-like Transcription Factor Family AT4G28610 51.093 1.02e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu7g00789 Myb_DNA-binding 9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00789 - - gmx:100793593 792.727