Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00788 ATGGCCATGAGTGCAGCTTCAGCCACTGGTTCTCACTCCCGAAATGGATTCCGTTTCATGGACCAGGAAAATGGAGACTACAATCAGCACAACGATGGCCAAGCATTCTCCGTGGCCGGAAGTGAGGATTCTGAAGGGAAGAAAGCATTCTACAGCATTGCAGAGAAACGGAAAGATAAGAGAAGTTTAATGAGCAATGACCAAGAAGAAGATGACTATATTTTGGCTGAGGCAAGGCAACCATTGTGGCGCAAGGTTCCAATAGCCTCAAGCCTAATCAACCCATATCGCATAGTCATAATCTTGCGTTTCGTTATCCTAGTTTTCTTCTTCCACTTGCGCATCACAACTCCAGTGCATGATGCACTTGCCTTATGGATAATCTCTGTAGTCTGTGAAATCTGGCTTGCATTATCTTGGATGGTTGACCAACTCCCTAAGTGGTTCCCCATTACTCGTGAAACTTACCTTGAACGTTTGTCCTTAAGGTTTGAGCGTGAGAAGGAGCCAAACCTTCTAGCCCCGGTTGATATATTTGTAACCACTGCAGACCCTTTGAAGGAACCACCTATTATAACCGCAAACACGGTTTTATCAGTCTTGTCTGTTGATTACCCTGCTGAGAAGGTTAGCTGCTATGTCTCAGATGACAGTGCTTCAATGCTTCTCTTTGATACCTTGTCAGAAACTGCTGAGTTTGCTAGAATATGGGTTCCTTTTTGTAACAAGTATAACATTGAGATAAGGGCACCTGAGTTTTATTTCTCTGAGAAACTTGATTACTTGAAAGATAAGGTGCAGCCCACATTTGTTAAGGATCGCAGGGCAATGAAGAGAGAATACGAAGAATTCAAGGTGAAAATTAATGTACTGGTTGCAAAGGCTCAGAAAAAACCAGAAGAAGGGTGGGTGATGCGAGATGGTAACCCATGGCCTGGGAGCAACATGGATGATCATCCAGGAATGATTCAGGTATGTCGAGGAAGTACTGGTGCACAGGACAAGGAATGCAAGGAACTACCACGTCTTGTGTATGTTTCCAGGGAAAAACGTCCTGGATATCAACACCACAGGAAAGCTGGTGCCATGAATGCTCTGGTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGCATTAAATCTGGATTGTGACCAATACATCAACAATAGCAAGGTTCTTAGGGAGTCCATGTGCTTTTTAATGGACCCCCAACTTGGAAAGAAGTTCTGTTATGTCCAATTTCCAAAAAGGTTTGATGGCATCGATTGCAACGACAGATATGCTAATCACAATACTGTGTTCTTTGATATCAACATGAAATGCCTTGATGGGATTCAAGGTCCTCTGTATGTTGGTACTGGATGCGTGTTCAACAGGCAAGCATTATATGGCTATAATCCACTTTCTGATAAAATGCCAAAGATGAAGAGTTGTTGCCGGCCTTCATCCAGCAGCTGTTGCTCTAGTGACTCTGAATCCTCATCTGATGACGAGACAGATCAAGAGCTTGTAGACTTTGATGACGAAGAGGAGGAGGAATTATCCTTCATGTCCCAGAAAAGTTTAGAGAAACGATTTGGACAATCACCGGTTTTCATTGCTTCTGCTTTGATGGAAGATGGTGGATTTCCCAAAGGCACCAACACCCGAGTACTGATTAAGGAAGCAATTCATGTTATAAGCTGTGACTATGAAGAGAAAACTGAATGGGGAAAAGAGATTGGGTGGCTATATGGCTCAGTCACAGAAGACATCTTAACTGGGTTTAACATGCATTGTAGAGGATGGAAATCGGTGTACTGCATGCCAAAGAAAGCAGCTTTTAAGGGATCTGCTCCTATAAATTTATCAGATCGATTACACCAAGTTCTGAAATGGGCTTCGGGTTCTACTGAGATTTTCTTTAGTGGATATTGCCCTTTGTGGTATGGCTATAGCGGAAAACTGAAATGGCTGCAGAGGTTGGCCTACACTAATTCCATCGTCTATCCATTTACCTCCGTCCCCCTGCTGATCTACTGTACAATTCCAGCTGTCTGTCTTCTGACTGGAAAGTTCATCATCCCCACTCTGTCAAACCTTGCTAGCATTTGGTTAATGGCCTTGTTTATCTCCATCATCTTAACCTGTGTGCTAGAGCTTCGTTGGAGTGGGGTTAGCATTCAGGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGGGGTGTATCTGCACACCTTTTTGCTGTATTTCAAGGTCTTCTTAAAGTTGGTGGAGTAAACACTAACTTCACTGTGAGAGCAAAATCAGCACATGACACCTCATTTGAACAGTTCCATCTCTTCAAGTGGACTACTCTTCTAATCCCACCAACAACCCTTGTAATCTTAAATATGGTGGGAATTGTGGCAGGAATCTCTGATGCCATCAACAATGGCTATGACTCATGGGGACCTTTCTTTGGGAAGCTTTTCTTCTCCTTGTGGGTCATTGTGCACTTGTATCCTTTCCTCAAAGGACTAATGGGAAAGCAAAACAGAACCCCTACCATTGTAGTCCTCTGGTCAATACTTTTAGCCATAATTTTCTCAATGATTTGGGTGCGAATTGATATTTTCTTGCCCAAGCAGACAGGTCCAGCACTCAGACAGTGTGGGATAAGATGCTAA 2652 0.4344 MAMSAASATGSHSRNGFRFMDQENGDYNQHNDGQAFSVAGSEDSEGKKAFYSIAEKRKDKRSLMSNDQEEDDYILAEARQPLWRKVPIASSLINPYRIVIILRFVILVFFFHLRITTPVHDALALWIISVVCEIWLALSWMVDQLPKWFPITRETYLERLSLRFEREKEPNLLAPVDIFVTTADPLKEPPIITANTVLSVLSVDYPAEKVSCYVSDDSASMLLFDTLSETAEFARIWVPFCNKYNIEIRAPEFYFSEKLDYLKDKVQPTFVKDRRAMKREYEEFKVKINVLVAKAQKKPEEGWVMRDGNPWPGSNMDDHPGMIQVCRGSTGAQDKECKELPRLVYVSREKRPGYQHHRKAGAMNALVRVSAVLSNAPFALNLDCDQYINNSKVLRESMCFLMDPQLGKKFCYVQFPKRFDGIDCNDRYANHNTVFFDINMKCLDGIQGPLYVGTGCVFNRQALYGYNPLSDKMPKMKSCCRPSSSSCCSSDSESSSDDETDQELVDFDDEEEEELSFMSQKSLEKRFGQSPVFIASALMEDGGFPKGTNTRVLIKEAIHVISCDYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKKAAFKGSAPINLSDRLHQVLKWASGSTEIFFSGYCPLWYGYSGKLKWLQRLAYTNSIVYPFTSVPLLIYCTIPAVCLLTGKFIIPTLSNLASIWLMALFISIILTCVLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVGGVNTNFTVRAKSAHDTSFEQFHLFKWTTLLIPPTTLVILNMVGIVAGISDAINNGYDSWGPFFGKLFFSLWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLAIIFSMIWVRIDIFLPKQTGPALRQCGIRC* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00788 883 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 281 470 IPR029044 -
Lapu7g00788 883 Pfam Cellulose synthase 176 876 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lapu7g00788 883 MobiDBLite consensus disorder prediction 1 38 - -
Lapu7g00788 883 FunFam Cellulose synthase 293 467 - -
Lapu7g00788 883 MobiDBLite consensus disorder prediction 1 45 - -
Lapu7g00788 883 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 79 850 - -
Lapu7g00788 883 SUPERFAMILY Nucleotide-diphospho-sugar transferases 190 699 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00788 Lapu-Chr7 9374979 9379440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00788 67 883 Cell Wall Biosynthesis AT5G17420 68.485 0.0 1213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00788 7 9374979 9379440 Lapu7g00788 7 9374979 9379440 ECH