Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00785 ATGAAGTGTCTGCGGTCAGGAGAGTCGTTGGGAGGAGCTGATGAAGTGTTTCCTTCATCTGGATCTCTTGCAAGTGCAACCAAGGACTTTTCAGCTAGTGAACACTCTTGCTTGGCTGAACATATTGATAAGAAGCAGGACACTGGGAACATAGAAGAAGCTGAGTCATCCTTACGTGAGAGTGGTGTCTTGAACTATGAGGAAGCTAGAGCTCTGCTAGGAAGATACGAATATCAGAAAGGAAATATAGTAGCTGCTTTACATGTCTTTGAGGGAATAGACATAGGCGTTGTGACTCCTAAGATCAAAATTGCCCTTTCCAGAAGTAGAGAACACCGCAAGAGACATTCTCAAAATCATGCTGAACCGCCAATGTCTATACATTCTGTTGGCTTACTGTTGGAATCTGTCTTCCTAAAAGCAAAATCTTTGCAGATTCTTGAAAGGTTTAAAGAGGCTGCCCAATCTTGCAAAGTTATTCTGGATATAGTGGAGTCTTCATTGCCCGAAGGCTTGCCTGATAACTTTGGTGCTGAATGTAAATTACAGGAGACCCTGAACAAGGCAGTTGAACTGCTTCCAGAATTATGGAAACTTGCTGATTGTCCACGTGAAGCTATTTTGTCTTACCGACGAGCACTACTTCATCAATGGAATCTTGATGCAGAGACTATAGCAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTTTACAGTGGAGGAGAAGCCACACCACCTAATCTCCGTTCCCAAATGGATGGCTCATTTGTACCTAGAAACAACATAGAAGAGGCTATACTTATCTTAATGATTTTGTTAAGAAAAGTCACTCTAAATAGAATTGAGTGGGATCCTTCAATTTTAGACCACCTCTCATTTGCTCTGTCAGTTTCTGGAGATTTGACAGCTTTAGCCAATCAATTGGAAGAACTGCTTCCACGGACAATTCATAGAAATGATAGGTACCATACTCTGGCTCTTTGTTATTATGGAGCAGGTAAGGATCTGGTAGCACTGGATTTTCTAAGAAAGTTGTTCAGTGGTAGAGAGGACCAACACCATGTACCTGGTTTGTTAATGGCTTCTAAGATTTGTTGTGAGAACTCTGCTCTTGCAGAAGAAGGAGTAAGCTTTGCTAAGCGAGTGCTTCAGAACATGGATGTCAGATGTGATCAGCTAGAAGATCATGCCAATTTCTTTCTTGGTGTCTCACTTTCAGCACAGTCGAGACTGGCTATTTCTGAGACTGAGAGGCTTAAGAGACAATCGGAGGCACTTCGTGCCCTAGAAACTGCCGCCAGAACGAGAAACCCCCTTGTACTATACCATCTCAGTCTAGAATATGCAGAACAAAGGAAGTTGGATGCTGCACTTCATTATGCAAAATGCTGTATAAAACTGGAAGGTGGTTCTAATATTAAAGGATGGTTGTTGTTAGCCCGGATATTATCTGCTCAAAAACAGTTTTTGGATGCCGAATCTGTTATTGATTCTGCTTTGGATCAAACTGGAAAATGGGATCAGGGTGATTTGTTGCGAACAAAAGCAAAACTTCAAATTGCACAGGGTAAGTTAAGGAATGCCATTGAGACATATACTCAGCTTCTTGCTATTCTTCAAATTCAGAGTAAAGGTTTTGGTTCTGGAAAGAAGCTATATAAGGACAATAGAGATCGTGCTAGGAACTTGGAAGTGGAAGTATGGCATGATATTACTTATGTATATATCAGTCTTTTACAGTGGCATGATGCAGAGGTGTGTCTTTCAAAATCCAAGGCCATCAAACCACTCTCTGCATCTAGATGTCATGCAATAGGCATAATGTACGAAGCAAAGGGCCACTACAAAGAGGCTCTAAAATATTTTGGTGATGCTTTGGACATTGATCCTGGCCATGTCCTTAGCTTAGTCTCCAGTGCTGTAGTTCTTAAACGATGTAGTAATCACTCAAATCCAGCAGTTAAAAGCTTTCTGATGGATGCCCTACGGCACGACAGATTCAATGCTTCTGCTTGGTATAATCTTGCCCTTCTTCACAAAGCTGAGGGCACAGCATCATCATTAGTTGAAGCTGCAGAATGTTTTCAAGCTGCACATTTTCTTGAAGAATCTGAACCTGTTGAACCTTTCAGATGA 2136 0.4129 MKCLRSGESLGGADEVFPSSGSLASATKDFSASEHSCLAEHIDKKQDTGNIEEAESSLRESGVLNYEEARALLGRYEYQKGNIVAALHVFEGIDIGVVTPKIKIALSRSREHRKRHSQNHAEPPMSIHSVGLLLESVFLKAKSLQILERFKEAAQSCKVILDIVESSLPEGLPDNFGAECKLQETLNKAVELLPELWKLADCPREAILSYRRALLHQWNLDAETIAKIQKEFVVFLLYSGGEATPPNLRSQMDGSFVPRNNIEEAILILMILLRKVTLNRIEWDPSILDHLSFALSVSGDLTALANQLEELLPRTIHRNDRYHTLALCYYGAGKDLVALDFLRKLFSGREDQHHVPGLLMASKICCENSALAEEGVSFAKRVLQNMDVRCDQLEDHANFFLGVSLSAQSRLAISETERLKRQSEALRALETAARTRNPLVLYHLSLEYAEQRKLDAALHYAKCCIKLEGGSNIKGWLLLARILSAQKQFLDAESVIDSALDQTGKWDQGDLLRTKAKLQIAQGKLRNAIETYTQLLAILQIQSKGFGSGKKLYKDNRDRARNLEVEVWHDITYVYISLLQWHDAEVCLSKSKAIKPLSASRCHAIGIMYEAKGHYKEALKYFGDALDIDPGHVLSLVSSAVVLKRCSNHSNPAVKSFLMDALRHDRFNASAWYNLALLHKAEGTASSLVEAAECFQAAHFLEESEPVEPFR* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00785 711 Pfam Tetratricopeptide repeat 602 632 IPR013105 -
Lapu7g00785 711 PANTHER PROTEIN NPG1 1 711 IPR043376 -
Lapu7g00785 711 SUPERFAMILY TPR-like 510 683 IPR011990 GO:0005515
Lapu7g00785 711 Gene3D Tetratricopeptide repeat domain 104 545 IPR011990 GO:0005515
Lapu7g00785 711 Gene3D Tetratricopeptide repeat domain 546 707 IPR011990 GO:0005515
Lapu7g00785 711 ProSiteProfiles TPR repeat profile. 599 632 IPR019734 GO:0005515
Lapu7g00785 711 SMART tpr_5 438 471 IPR019734 GO:0005515
Lapu7g00785 711 SMART tpr_5 599 632 IPR019734 GO:0005515
Lapu7g00785 711 SMART tpr_5 134 167 IPR019734 GO:0005515
Lapu7g00785 711 SMART tpr_5 565 598 IPR019734 GO:0005515
Lapu7g00785 711 SMART tpr_5 509 542 IPR019734 GO:0005515
Lapu7g00785 711 SMART tpr_5 669 705 IPR019734 GO:0005515
Lapu7g00785 711 SMART tpr_5 473 506 IPR019734 GO:0005515
Lapu7g00785 711 SUPERFAMILY TPR-like 420 539 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00785 Lapu-Chr7 9351897 9357741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00785 1 711 Calmodulin-binding Proteins AT4G28600 59.198 0.0 797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00785 7 9351897 9357741 Lapu6g00383 6 3858138 3863638 PCT