Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00779 ATGGAGCATGTGATTGGTGGCAAGTTTAAATTGGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTCTATTTAGGTGTTAATATACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCAAAACTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAATTGAGGGAGACTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAATTATTGTAACCGGAAGTTCTCATTGAAGACAGTGTTAATGCTTGCTGATCAATTGATTAACCGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGATATTAAGCCTGACAATTTCTTAATGGGTCTAGGACGGAAAGCAAATCAAGTGTATGCCATTGATTATGGCCTTGCAAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGTACAGCACGCTATGCAAGTGTCAATACCCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGCTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCCTGGCAGGGACTGAAGGCTGGCACCAAAAAACAAAAATATGATAAAATCAGTGAGACAAAGGTGTCAACTCCCATAGAGGTGCTTTGCAAATCTTATCCCTCTGAATTTGTATCATACTTCCACTATTGCCGATCATTGCGATTTGAGGACAAACCAGATTATTCGTATTTAAAGAGACTTTTCCGAGACCTGTTTATTAGAGAAGGCTATCAGTTTGACTACATTTTCGACTGGACTATGTTAAAGTATCCACAAATTAGTAGCAGCTCAAGAGGGCGGCATGGCACTGGCAAGGCGGCTATGCAAGCAAGTCCACATGTACAAAAGCCAGAAAAGATCACAGTTGGGAAAGACATTCGGGAGAAATTCTCTGGTGCAGTTGAAGCATTCTCCAGGAGGAATCCTGCAGGTTCAAGTCCTCATGTTGATCACGTCAAACAGAGGAGTTTTGAGGATGTACCAGTGCAAAAGGATTTGCACTATGGTCAGCACAATACCGGTCGATATGGCAGCAGTTCTAGAAGAGCCATGATCACATCAAACAAACCAGTTTCCTCAGGTGACCATACTGGCAGGCCAACCATAACTGTGACCCGTGCATCTGGTGCTCATAGAGTTCAACCCGCCTATGACACCAAACAAGCAAATTATGCACGCGGCTCTGCCAGAGGCCACCGTGATGATCCTCTCAGGAGCTTTGAGCTCCTCAACATCAGGAAGTAA 1359 0.4371 MEHVIGGKFKLGRKIGSGSFGELYLGVNIQTGEEVAVKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGIEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISETKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTMLKYPQISSSSRGRHGTGKAAMQASPHVQKPEKITVGKDIREKFSGAVEAFSRRNPAGSSPHVDHVKQRSFEDVPVQKDLHYGQHNTGRYGSSSRRAMITSNKPVSSGDHTGRPTITVTRASGAHRVQPAYDTKQANYARGSARGHRDDPLRSFELLNIRK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00779 452 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lapu7g00779 452 PANTHER CASEIN KINASE-RELATED 8 335 - -
Lapu7g00779 452 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00779 452 Gene3D Transferase(Phosphotransferase) domain 1 1 340 - -
Lapu7g00779 452 CDD STKc_CK1_delta_epsilon 8 282 - -
Lapu7g00779 452 FunFam Casein kinase 1-like protein 1 330 - -
Lapu7g00779 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lapu7g00779 452 FunFam Putative Casein kinase I 1 85 - -
Lapu7g00779 452 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00779 452 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00779 452 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00779 Lapu-Chr7 9288071 9296400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00779 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 2.59e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lapu7g00779 Pkinase 4.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00779 K08960 K08959 gmx:100789031 855.899