Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00778 ATGATGAAAGTGGGATTCGAGCTGGCTCATGCAAACTATAATCCAAACATGATTCGTCCACACATGCATGAAACATGGGATCACTACTCAAACATTACTTCCTTGCCATTTTCAGCTCCAACCCCATCAAACCTATATCCAAAGCCAGCAACAGAAAACCACTGCCTAAACTTGGGGCAGAATGAACTCTCTGATTGGATGGAGGAACACATTGGTGACATCACCAAACACCTTGTTGAAGACTTACCAGAAACCACTTCTGATAACTTGATGGCTAATAACACAACAAGGGTTTCCCATCACAGCTTTGTTCCCTCACTTTCACCCAACTTCAGTCAAAGAAAACCTTCATTCTTTAGACCCCAATTTGAGGCCATCACCAACGATCCCACAAACTTCAATGTTCACTCAGGTTTAGATCTTAGTTCCAATGTTTGCGATCAAGGGTTGAGCCTGATAACCCTTCTAATGGAGTGTGCAGTGGCAATCTCAGTTGACAACCTGGGTGAGGCTCATAGGATGTTACTAGAGCTAACACAACTGGCCTCACCCTACAAAGCATCATGTGCTGAACGTGTTGTTGCTTATTTTGCCAAGGCCATGACTGGCAGGGTTATGAATTCTTGGCTTGGGGTGTGTTCACCTTTGGTTGATCACAGGAACATTAACTCAGCATTCCAAGTGTTCAACAACGTTTCCCCTTGCATCAAATTTGCTCACTTCACTTCCAACCAGGCAATCCTTGAGGCGGTGAACCATTGTGACAGTATTCACATAATTGACTTGGACATCATGCAAGGGCTGCAATGGCCAGCTTTTTTCCACATATTAGCCACCAGAATGGAGGGTCCACCTCAGGTCACAATGACATGTTTGGGAACCTCAATGGAACTCCTTGTTGAAACCGGGAAACAACTCTCAAACTTTGCCAGAAGGCTTGGCATGTCATTGAAGTTCCACCCCATTGCAAGCAAGTTTGGGGAAGTAATTGATGTGTCCATGCTGCATGTAAAGCCTGGTGAGGCAGTGGCAGTGCATTGGTTGCAGCATTCACTCTACGATGCAACTGGGCCTGATTGGAAAACACTGAGGCTCCTTGAGGAGTTGGAGCCAAGAATCATCACCTTGGTGGAGCAGGATGTGAACCATGGAGGGTCTTTCTTGGACCGTTTTGTTAGCTCCCTGCACTACTACTCCACCCTTTTTGATTCTCTCGGAGCATACTTGCACTTTGATGATGCAAATAGGCACCGAGTGGAGCATGGCCTTCTCTCTAGGGAGATCAACAATGTGTTGGCCATAGGAGGCCCTAAGAGGAGTGGTGAAGATAAGTTTAGGCAGTGGAGAAGCGAGCTTGCAAGGCACTCTTTTGTGCAAGTTCCAATGAGTGCCAATTCTATGGCTCAAGCTCAGTTGATATTGAACATGTTTTCACCATCTTATGGGTATACCCTTGCACAAGTTGATGGCACATTAAGGCTTGGATGGAAGGATACAAGTTTGTACACGGCTTCTGCATGGACCTCCTCTACTTCTAACTAG 1542 0.4585 MMKVGFELAHANYNPNMIRPHMHETWDHYSNITSLPFSAPTPSNLYPKPATENHCLNLGQNELSDWMEEHIGDITKHLVEDLPETTSDNLMANNTTRVSHHSFVPSLSPNFSQRKPSFFRPQFEAITNDPTNFNVHSGLDLSSNVCDQGLSLITLLMECAVAISVDNLGEAHRMLLELTQLASPYKASCAERVVAYFAKAMTGRVMNSWLGVCSPLVDHRNINSAFQVFNNVSPCIKFAHFTSNQAILEAVNHCDSIHIIDLDIMQGLQWPAFFHILATRMEGPPQVTMTCLGTSMELLVETGKQLSNFARRLGMSLKFHPIASKFGEVIDVSMLHVKPGEAVAVHWLQHSLYDATGPDWKTLRLLEELEPRIITLVEQDVNHGGSFLDRFVSSLHYYSTLFDSLGAYLHFDDANRHRVEHGLLSREINNVLAIGGPKRSGEDKFRQWRSELARHSFVQVPMSANSMAQAQLILNMFSPSYGYTLAQVDGTLRLGWKDTSLYTASAWTSSTSN* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00778 513 Pfam GRAS domain family 152 508 IPR005202 -
Lapu7g00778 513 ProSiteProfiles GRAS family profile. 143 508 IPR005202 -
Lapu7g00778 513 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 102 504 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00778 Lapu-Chr7 9279601 9281142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00778 147 508 GRAS Transcription Factor Family AT3G54220 56.640 1.61e-137 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu7g00778 GRAS 4.3e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00778 - - gmx:100775656 878.241