Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00777 ATGGATTCTGCAAGGAGTTGGCTTCAGAAGTTCCAGCCTCGAGATAGAACCAGAGCTGCTGCGAAGAAAAAGGAGGAGGATAGTAATGGAGGAAACGACGATTTGAATGCGGCGGTGGATGAAGCGATGCTTTCCAGCGTCACGAAGCAGAAGGTGGCCGCAGCAAAGCAGTACATTGAAAACCATTACAAGGAGCAGATGAAGAACCTTCAGGAGAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAGGATCAAAACAACCTGCTTAAATTTTTAGAGAAAAAGGAAACTGAATATATGCGCCTTCAAAGGCATAAGATGGGTGTGGATGATTTTGAGCTATTAACAATGATTGGAAAAGGAGCATTTGGGGAGGTCAGAGTCTGTAGGGAGAAGACTAGTGGTCATGTGTATGCAATGAAGAAGCTAAAAAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAGCATGTTAAAGCTGAAAGGAATCTCCTCGCGGAGGTTGACAGCAATTGCATAGTCAAACTTTATTGTTCTTTCCAGGATGATGAATATTTGTATCTTATTATGGAGTATCTACCCGGTGGGGATATGATGACTCTACTAATGAGAAAGGATATCTTGACTGAAGATGAAACCAGATTTTATGTAGGAGAAACGGTTCTGGCTATTGAATCTATACATAAACACAATTATATACATAGGGATATCAAGCCGGACAATTTATTACTTGAAAGATTTGGACACTTGAAATTGTCAGATTTTGGACTTTGTAAACCATTAGATTGCAATACACTTGAAGAAAAGGATTTTTCTGTGGGTCAGAATGTGAATGGATCTACACAAAATGAAGAGCGGATAGCTCCTAAACGCTCACAACAAGAACAACTGCAACATTGGCAAATGAACAGGAGAACACTTGCTTATTCCACAGTTGGTACACCAGATTATATTGCTCCGGAAGTTCTTTTGAAGAAAGGTTACGGAATGGAATGTGATTGGTGGTCACTCGGAGCTATTATGTACGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTTGACTTGTAGGAAGATAGTAAATTGGAAAGCTTACTTGAAATTTCCTGAAGAAGCTAGGCTGTCCCCAGAAGCTAAAGACCTTATCAGTAAACTTTTGTGTAATGTCAATCAGAGGCTGGGGTCAAATGGTGCAGATGAAATAAAGGCTCATCCATTCTTCAAAGGTATTGAATGGGATAAGCTGTATCATATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAGTTAGACACTCAAAATTTTGAAAAGTTTGACGAGTCTGACAGCCAAACTCAATCATCATCAAGATCTGGTCCATGGAGGAAGATGCTTTCATCTAAGGACTTAAATTTTGTTGGATACACATACAAGAACTTTGAAATTGTCAACGATTATCAAGTTCCTGGGATGGCTGAACTGAAGAAGAAACAGTCCAAACCAAAGAGGCCAACCATCAAGTCACTTTTCGAAACACCAGAGCAAGAGTTGTCTGATACATCTGCTCAAGGAAGCTTTTTAAAGCTCTTGCCACCCCAGTTAGAGGTATCTCGCAGCGACAAGAATCTTCCTCCCAGCTCCTAA 1659 0.4093 MDSARSWLQKFQPRDRTRAAAKKKEEDSNGGNDDLNAAVDEAMLSSVTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTSGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDILTEDETRFYVGETVLAIESIHKHNYIHRDIKPDNLLLERFGHLKLSDFGLCKPLDCNTLEEKDFSVGQNVNGSTQNEERIAPKRSQQEQLQHWQMNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMLTCRKIVNWKAYLKFPEEARLSPEAKDLISKLLCNVNQRLGSNGADEIKAHPFFKGIEWDKLYHMEAAFIPEVNDELDTQNFEKFDESDSQTQSSSRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKQSKPKRPTIKSLFETPEQELSDTSAQGSFLKLLPPQLEVSRSDKNLPPSS* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00777 552 Gene3D Phosphorylase Kinase; domain 1 119 448 - -
Lapu7g00777 552 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 471 - -
Lapu7g00777 552 Pfam Protein kinase domain 122 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00777 552 MobiDBLite consensus disorder prediction 500 552 - -
Lapu7g00777 552 MobiDBLite consensus disorder prediction 282 302 - -
Lapu7g00777 552 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lapu7g00777 552 SMART serkin_6 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00777 552 Pfam Protein kinase C terminal domain 438 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lapu7g00777 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Lapu7g00777 552 MobiDBLite consensus disorder prediction 1 36 - -
Lapu7g00777 552 FunFam Non-specific serine/threonine protein kinase 205 272 - -
Lapu7g00777 552 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Lapu7g00777 552 SMART pkinase_C_6 420 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lapu7g00777 552 MobiDBLite consensus disorder prediction 516 532 - -
Lapu7g00777 552 CDD STKc_NDR_like 119 483 - -
Lapu7g00777 552 Gene3D Transferase(Phosphotransferase) domain 1 205 437 - -
Lapu7g00777 552 FunFam Non-specific serine/threonine protein kinase 318 437 - -
Lapu7g00777 552 Coils Coil 63 83 - -
Lapu7g00777 552 MobiDBLite consensus disorder prediction 9 31 - -
Lapu7g00777 552 ProSiteProfiles Protein kinase domain profile. 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00777 552 FunFam Non-specific serine/threonine protein kinase 92 204 - -
Lapu7g00777 552 CDD MobB_NDR_LATS-like 55 116 - -
Lapu7g00777 552 SUPERFAMILY Protein kinase-like (PK-like) 94 473 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00777 Lapu-Chr7 9269226 9276813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00777 1 541 AGC Kinase Gene Family AT3G23310 76.103 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lapu7g00777 Pkinase 7.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00777 K08790 - gmx:100779528 1020.38