Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00770 ATGGGTCTTAGAGACATTGGTGCTTCACTACCCCCAGGGTTTCGCTTTTATCCCAGTGATGAGGAGTTGGTCCTTCATTACCTTTACAAAAAGATCACAAATGAGGAAATTCTGAAGGGCACCTTGATGGAAATCGACTTGCACACATGCGAGCCATGGCAACTCCCAGAGGTGGCTAAGCTTAACGCAAACGAATGGTACTTCTTCAGCTTTCGTGACCGCAAATACGCAACCGGCTACCGGACCAATCGCGCAACGACATCTGGGTACTGGAAAGCCACGGGAAAGGATCGTACGGTGTTTGACCCATCCACGCGGGAGGTTGTAGGGATGAGGAAGACTTTGGTGTTCTACAGGAACAGGGCCCCAAATGGCATCAAAACGGGTTGGATCATGCACGAGTTTCGTTTGGAGACGCCACATATGCCCCCAAAGGAGGACTGGGTTTTGTGTAGAGTGTTCCACAAAGGCAAAGCAGACAACACTGCCAAACTCAACTCACAGCTCATCTATGAGAGCACAGTTCCATCCCTAACTTTGGCTTCGTCATCTCCAACCAACCAAACCATTGGGTGTGACCAACTTCCCCATTTCTCTTCCTCAATCACAACCCATCATCTCCACCAAAACCAAACCACCAACTCTTTCATGGGTCTCCTTCACTTTTCTCGGGAAACAAATGCAAACTCTAGCTCCATTACTCAAATAAGCCCCAAATGTGATGATGCCTATGGCTTCCTATGGGACATGGACCTCCAAGAAAATAGCTTCCATGATGGCGTCGCCTCCGACATGGTCGACGGAATGAGATTCGAGGTCGACAATAATAGTGTGGTCTTGTTGTGA 846 0.487 MGLRDIGASLPPGFRFYPSDEELVLHYLYKKITNEEILKGTLMEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRTVFDPSTREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKADNTAKLNSQLIYESTVPSLTLASSSPTNQTIGCDQLPHFSSSITTHHLHQNQTTNSFMGLLHFSRETNANSSSITQISPKCDDAYGFLWDMDLQENSFHDGVASDMVDGMRFEVDNNSVVLL* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00770 281 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Lapu7g00770 281 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 211 - -
Lapu7g00770 281 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Lapu7g00770 281 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Lapu7g00770 281 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00770 Lapu-Chr7 9176664 9181368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00770 9 171 NAC Transcription Factor Family AT1G76420 56.287 1.34e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu7g00770 NAM 7.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00770 - - gmx:100783645 477.633