Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00764 ATGCCGTCGCTCCTCTCTCCGGGGAGAATCCACTGTCTGGAGGTGGAGAATTTCAAGTCCTACAAGGGCTTCCAAATGATCGGTCCCTTCTACGACTTCACCGCCATCATTGGCCCCAACGGCGCCGGTAAGTCCAACCTCATGGACGCCATCAGCTTTGTCCTCGGCGTCCGCACCGGTCAGCTCCGCGGCGCGCAGCTCAAGGACCTCATATACGCCTTCGACGACCGCGAGAAGGATCAGAAGGGTCGCCGAGCCTTCGTCCGCCTCGTCTACCACCTCGCCAATTCCGCTGAGATCAGATTCACCCGCACCATCACCAGCGCCGGCTCCAGCGAGTACCGCATCGACGACACCCTCGTTAATTGGGACACCTACAACAACAGGCTCAAGTCCCTCGGCATCCTCGTCAAAGCTCGCAATTTCTTGGTCTTTCAGGGTGATGTTGAGTCCATTGCGTCTAAGAATCCCAAAGAGCTCACTGCACTGGTGGAGCAGATATCTGGCTCTGATGAGTGCAAGAGGGACTATGAACAGTTTGAAGAGGAAAAAGGCACTGCCGAAGAAAAATCAGCACTTGTTTATCAGAAGAAGAAGACTGTGGTTATGGAAAGAAAGCAGAAGAAAGAACAGAAGGAAGAAGCAGAGAAGCATCTCCGCCTGCAACAAGAACTGTGTGGTACTTCTAGTCACCATAAGAATCTTATTGTGGCAGGCGAAGTTTTCAAGTATTTGTTTTTTCTTTTGCAGAAATCTATGAAGAGAGAACATTTCTTGTGGCAGTTGTTTAATATACATAATGATTATGTTAAAACAATTAAGGATCTTGAAGATGAGGAAAGAAGTCGTGAAGGTGTTGTTAAAGAACTAGAAAGTTTTGAAAATGAAGCTAGTAAAAAGAAGAAAGAACAGGCCAAATATTTGAAAGAGATTGCACTGCGAGAAAAGAGAATTAACGAGAAAAACAGCAAGCTTGACAAGAGTCAGCAGCCTGAGCTTCTGAAGTTAAAGGAGGAAATGAATCGTATCACTTCAAAAATTAAAAAAGGGAAGAAAGAACTTGATAAAAAAAAGGTTGAACGGACGAAGCATGATGCTGATATAGCATTACTACGGAATGGCATTCAGGATCTTACAGCAAAAATGGCAGACCTTCAGGAAAAGGGACGGGATGTTGATGACGAGCTTGATTTGCAAGGCAATGATTTGGATGAGTATTTTCGAATCAAAGAGGAAGCTGGGATGAAAACTGCAAAGCTTAGAGAAGAAAAGGAGCTTCTAGATAGGAAACTAAATGCTGATAGCGAAGCTCAAAAGAATTTGGAAGAAAATCTTCAACAGTTAAGAAACAGGGAGTCTGAACTGAATTCACAGGAAGAACAGATGCGAGCAAGGCTTGAAAAGATTCTTGATAATTCTGCTAAAAATAGAACTGGCCTTGAAAATTTGAAAAAAGAACTACGTTTGATGCAGGACAAACATCGTGATTCCAAAAAAAAGTATGAAAATTTGAGGTTAAAAATTGGTGAGTTAGAAAATCAACTACGTGAATTGAGGGCTGATAGATACGAAAGTGAGAGAGATGTTAGGTTGTCTCAGGCTGTTGAGACTCTGAAACGCCTGTTTCAAGGAGTTCATGGTCGCATGACTGATCTTTGTAGGCCAACACTGAAGAAGTATAACCTTGCTGTTACTGTTGCTATGGGTAAATTTATGGATGCAGTTGTAGTTGACAAGGAGTCGACTGGGAAGGAATGTATCAAGTATTTAAAAGATCAAAGGCTTCCTCCCCAGACATTTATTCCTCTGGAATCAGTTCGGGTGAAGCCGATAATGGAAAGATTGCGTGCATTAGGGGGTACAGCAAAACTGGTTTTTGATGTGATTCATTTGATCCCTCCTTGGAGAAGGCAATTCTCTTTGCTGTTGGGAACACTCTTGTTTGTGATGATCTTGAGGAGGCCAAAATTTTAA 1974 0.4341 MPSLLSPGRIHCLEVENFKSYKGFQMIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGAQLKDLIYAFDDREKDQKGRRAFVRLVYHLANSAEIRFTRTITSAGSSEYRIDDTLVNWDTYNNRLKSLGILVKARNFLVFQGDVESIASKNPKELTALVEQISGSDECKRDYEQFEEEKGTAEEKSALVYQKKKTVVMERKQKKEQKEEAEKHLRLQQELCGTSSHHKNLIVAGEVFKYLFFLLQKSMKREHFLWQLFNIHNDYVKTIKDLEDEERSREGVVKELESFENEASKKKKEQAKYLKEIALREKRINEKNSKLDKSQQPELLKLKEEMNRITSKIKKGKKELDKKKVERTKHDADIALLRNGIQDLTAKMADLQEKGRDVDDELDLQGNDLDEYFRIKEEAGMKTAKLREEKELLDRKLNADSEAQKNLEENLQQLRNRESELNSQEEQMRARLEKILDNSAKNRTGLENLKKELRLMQDKHRDSKKKYENLRLKIGELENQLRELRADRYESERDVRLSQAVETLKRLFQGVHGRMTDLCRPTLKKYNLAVTVAMGKFMDAVVVDKESTGKECIKYLKDQRLPPQTFIPLESVRVKPIMERLRALGGTAKLVFDVIHLIPPWRRQFSLLLGTLLFVMILRRPKF* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00764 657 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 9 631 - -
Lapu7g00764 657 Coils Coil 424 472 - -
Lapu7g00764 657 Coils Coil 170 190 - -
Lapu7g00764 657 Pfam RecF/RecN/SMC N terminal domain 10 138 IPR003395 -
Lapu7g00764 657 FunFam Structural maintenance of chromosomes 1A 9 224 - -
Lapu7g00764 657 Coils Coil 480 528 - -
Lapu7g00764 657 Coils Coil 198 225 - -
Lapu7g00764 657 CDD ABC_SMC1_euk 10 157 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Lapu7g00764 657 SMART SMC_hinge_2 543 654 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lapu7g00764 657 Gene3D - 604 649 - -
Lapu7g00764 657 Coils Coil 368 395 - -
Lapu7g00764 657 Pfam SMC proteins Flexible Hinge Domain 543 647 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lapu7g00764 657 Coils Coil 276 310 - -
Lapu7g00764 657 Coils Coil 333 353 - -
Lapu7g00764 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 224 IPR027417 -
Lapu7g00764 657 Gene3D - 524 603 - -
Lapu7g00764 657 Gene3D - 8 227 IPR027417 -
Lapu7g00764 657 SUPERFAMILY Smc hinge domain 507 648 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00764 8 114 Structural Maintenance of Chromosomes family AT5G61460 33.333 1.35e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00764 K06636 - gmx:100785315 1061.98