Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00757 ATGGATTTTGATTCATCCTTCTTCCAGTACCAAAGCCTCAACACTCCCTCTGTAAATTCTTCTTTGTGTGCAGAAGCATTCCATTGGGAGGACTTTTTTCTCTTCAATGAAGAAAACACCACAGCCCTTGATGATAGTAATCCCTTCACCTTCAGTGACCACTCACAAATCAAGGAATCATCCTCAGATTCCAACTCTTCAGGCTCTTTGGTCAGCACTGAGTCACAGCTAGAAGTGTCCTCCAATTTAACTCATGCAAGACAAGGCCAAGTGGTGCTGAAAGAAGCAGCACATGCATCACCACCTCCGAAGGAGAGCATCAAAGAGAAGAGGCCCTTTAGGGGAGTGAGGAGAAGGCCATGGGGGAAATTTGCCGCTGAGATAAGAGACTCCACGAGAAATGGTGTTAGAGTGTGGATTGGCACATTTGACACAGCAGAGGCTGCAGCACTGGCCTATGACCAAGCAGCTTTGTCCACAAGAGGTTCCATGGCAGTGCTGAACTTCCCAGAAGAAGTGGTGAGGGAATCACTCAAAGACATGGCCAACAAGCCATGGGAAGATGGTTCCTCACCAGTGTTGGCACTCAAGAGGAAACACACCATGAGAAGAAAGTCCAAAGCCACAAACAAAAGGGCCAAAAGGGAGCACCATGGAATGGAGTTAGAGAATGTGCTTTCACAAAATGTGTTGGTGTTGGAGGATTTGGGCTCTGAGTATTTGGAACAGCTTCTCAGCTTGACTTCTTCTTCTTCTTCTTCTTCTTCTGATCATTTGCTTTGCTAG 786 0.4656 MDFDSSFFQYQSLNTPSVNSSLCAEAFHWEDFFLFNEENTTALDDSNPFTFSDHSQIKESSSDSNSSGSLVSTESQLEVSSNLTHARQGQVVLKEAAHASPPPKESIKEKRPFRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEEVVRESLKDMANKPWEDGSSPVLALKRKHTMRRKSKATNKRAKREHHGMELENVLSQNVLVLEDLGSEYLEQLLSLTSSSSSSSSDHLLC* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00757 261 MobiDBLite consensus disorder prediction 53 74 - -
Lapu7g00757 261 Gene3D AP2/ERF domain 112 172 IPR036955 GO:0003700|GO:0006355
Lapu7g00757 261 SMART rav1_2 112 176 IPR001471 GO:0003700|GO:0006355
Lapu7g00757 261 Pfam AP2 domain 113 162 IPR001471 GO:0003700|GO:0006355
Lapu7g00757 261 FunFam Ethylene-responsive transcription factor 2 111 171 - -
Lapu7g00757 261 ProSiteProfiles AP2/ERF domain profile. 112 170 IPR001471 GO:0003700|GO:0006355
Lapu7g00757 261 PANTHER DNA-BINDING DOMAIN 67 251 IPR044808 GO:0003700|GO:0009873
Lapu7g00757 261 SUPERFAMILY DNA-binding domain 113 171 IPR016177 GO:0003677
Lapu7g00757 261 CDD AP2 113 171 IPR001471 GO:0003700|GO:0006355
Lapu7g00757 261 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Lapu7g00757 261 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00757 Lapu-Chr7 8967336 8968121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00757 106 253 AP2-EREBP Transcription Factor Family AT3G23240 58.278 9.59e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lapu7g00757 AP2 2.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00757 K14516 - gmx:100784784 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00757 7 8967336 8968121 Lapu7g00757 7 8967336 8968121 ECH
Lapu6g00362 6 3559385 3560083 Lapu7g00757 7 8967336 8968121 PCT