Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00755 ATGACTTCCCCTTTCATCCAGAACCAAGATTGGGACATGTCGCAGGAGCCATCAGAAATTTTGTTCAATTCATTGCCCAGCAATGCTGTTCTTGACCCTATTCATGATTCTCTTTCCTTTGATATGATTGATTTCTCTGCGGCACCAGCACGAGGAAATCACAACCAGTTTGTGGTGAAGTCTGAAGAAGGGAAGAATAAGGAGAGGTCGTACAAAGGTGTGAGGAAAAGGCCTTGGGGAAAATATGCAGCAGAGATCAGAGACACAACCAGGAACGGCACAAGGGTTTGGCTTGGAACCTTTGACAGTGCAGAAGCTGCTGCGTTAGCTTATGACCAAGCTGCATTTTCCATGAGAGGCCATAATGCTGTACTCAATTTTCCGGTCCAAAGGGTGAAAGAATCTTTGCAAGAGATCCAATATACCTGCTTCAGTGGTTCTTCTCCCGCACTTGCACTCAAGGAGAGGCACTGCATCCAAAGAAAGTTATCATCAAAAGCTAAAAAGTGTAAAGGTAAAGACACATCAGAGGATCCAACACAAAGTGTGGTGGTCTTAGAGGATTTGGGAGTTGACTATTTAGAGCATCTTCTAAGCATATCCGATCAAAGTGCAAGCCCTAGCTGCTTCCACTAA 636 0.4465 MTSPFIQNQDWDMSQEPSEILFNSLPSNAVLDPIHDSLSFDMIDFSAAPARGNHNQFVVKSEEGKNKERSYKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSAEAAALAYDQAAFSMRGHNAVLNFPVQRVKESLQEIQYTCFSGSSPALALKERHCIQRKLSSKAKKCKGKDTSEDPTQSVVVLEDLGVDYLEHLLSISDQSASPSCFH* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00755 211 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Lapu7g00755 211 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Lapu7g00755 211 Gene3D AP2/ERF domain 70 130 IPR036955 GO:0003700|GO:0006355
Lapu7g00755 211 SUPERFAMILY DNA-binding domain 71 129 IPR016177 GO:0003677
Lapu7g00755 211 ProSiteProfiles AP2/ERF domain profile. 70 128 IPR001471 GO:0003700|GO:0006355
Lapu7g00755 211 Pfam AP2 domain 71 121 IPR001471 GO:0003700|GO:0006355
Lapu7g00755 211 SMART rav1_2 70 134 IPR001471 GO:0003700|GO:0006355
Lapu7g00755 211 CDD AP2 71 130 IPR001471 GO:0003700|GO:0006355
Lapu7g00755 211 FunFam Ethylene-responsive transcription factor 2 69 130 - -
Lapu7g00755 211 PANTHER DNA-BINDING DOMAIN 55 202 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00755 Lapu-Chr7 8916875 8917510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00755 59 206 AP2-EREBP Transcription Factor Family AT3G23240 57.432 5.15e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g00755 AP2 1.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00755 K14516 - gmx:100812017 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00755 7 8916875 8917510 Lapu7g00068 7 731100 731750 ECH
Lapu7g00755 7 8916875 8917510 Lapu7g00755 7 8916875 8917510 ECH