Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00751 ATGGTTGATTTCTCCACAACAGAAGAAAAGCACAACAAGGCAAAGCAATTGGTGGTGAAGTCCGAAGTGGAGAATAAGGAAAGGTCATACATAGGTGTGAGGAAAAGGCCTTGGGGAAAATATGCAGCAGAGATCAGAGACACAACCAGGAACGGCACAAGGGTTTGGCTTGGAACCTTTGATAGTGCAGAAGGTGCTGCTTTGGCCTATGACCAAGCTGCATTCTCCATGAGAGGCCATAATGCTGTGCTCAATTTTCCAGTCAAAAGGGTGAAAGAATCTTTGCAAGAGATCCAATATAGCTGCTTCAGTGGTTCTTCTCCCGCACTTGCGCTCAAGGAGAGGCACTGCATCCGAAGAAAGTTGTCATCAAAAGCTAAAAAGTGTAAAGGGAAAGACACATCAGAGGATCCAATAAAAAGTGTGGTGGTGTTAGAGGATTTGGGAGTTGAATATCTAGAGCAACTTCTCAGCATATCAGATCAAAGTGTAACTGTGTAA 501 0.4411 MVDFSTTEEKHNKAKQLVVKSEVENKERSYIGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSAEGAALAYDQAAFSMRGHNAVLNFPVKRVKESLQEIQYSCFSGSSPALALKERHCIRRKLSSKAKKCKGKDTSEDPIKSVVVLEDLGVEYLEQLLSISDQSVTV* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00751 166 CDD AP2 30 88 IPR001471 GO:0003700|GO:0006355
Lapu7g00751 166 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Lapu7g00751 166 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Lapu7g00751 166 SMART rav1_2 29 93 IPR001471 GO:0003700|GO:0006355
Lapu7g00751 166 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Lapu7g00751 166 ProSiteProfiles AP2/ERF domain profile. 29 87 IPR001471 GO:0003700|GO:0006355
Lapu7g00751 166 Gene3D AP2/ERF domain 29 89 IPR036955 GO:0003700|GO:0006355
Lapu7g00751 166 PANTHER DNA-BINDING DOMAIN 15 158 IPR044808 GO:0003700|GO:0009873
Lapu7g00751 166 Pfam AP2 domain 30 80 IPR001471 GO:0003700|GO:0006355
Lapu7g00751 166 FunFam Ethylene-responsive transcription factor 2 28 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00751 Lapu-Chr7 8849429 8850462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00751 14 165 AP2-EREBP Transcription Factor Family AT3G23240 57.516 1.42e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g00751 AP2 6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00751 K14516 - gmx:100812017 273.092