Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00740 ATGACTGGTTCAGGATCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTGAGAGGTTGCGTTTTTGCACCTTATTTTTGCCATGAGCAAGGTGCTACTCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCTCACCTCCCTGTGAGTGACCGTTGTGAACTGGCTTATCTCAAGGAACAAGCAGCCCAGAGTTGTCTCAATGCCTCTGTCAATGAAAACCCTAGTGAAAAATTATTTGAAAAGTCTTCAGCTACTTTACCCCAAGATCTTCAAAGTTGGTTTCAGGTGGAAAATTCCAACCTGGGGCCAGAATTTCTTCCTAACATGTGTACTAATTTATCAACCCAAAAGCATTATGGGAACAATGCTCTCATTGAAGATCTAAACCCTACCGCGATGAATTATGAAAATTCAGGCGCCATGGAAGAAAACAGCTCCTTTTCTAGCTTTGACGAGAGTTCTAATAGCTACTCCATGTCCTATGACATGCAAATAAACAGGAGGACGTGGGGTTTTCATGAAGTGGAGGACCTACATTCAGTGGCTTTTGGATACAGTACTCGATCACATTCATGA 606 0.4257 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCELAYLKEQAAQSCLNASVNENPSEKLFEKSSATLPQDLQSWFQVENSNLGPEFLPNMCTNLSTQKHYGNNALIEDLNPTAMNYENSGAMEENSSFSSFDESSNSYSMSYDMQINRRTWGFHEVEDLHSVAFGYSTRSHS* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00740 201 ProSiteProfiles LOB domain profile. 6 111 IPR004883 -
Lapu7g00740 201 Pfam Lateral organ boundaries (LOB) domain 7 65 IPR004883 -
Lapu7g00740 201 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00740 Lapu-Chr7 8714670 8715529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00740 7 182 AS2 family AT3G58190 36.406 1.39e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu7g00740 LOB 3.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00740 K13945 - gmx:100805623 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00740 7 8714670 8715529 Lapu7g00740 7 8714670 8715529 ECH
Lapu6g00352 6 3428244 3429108 Lapu7g00740 7 8714670 8715529 PCT