Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00739 ATGGCTTCTGCAACAACTGCAAATGACGCTGCTTCTGGTTCTTCCTTTGGATCTCCCTGTGGGGCATGCAAGTTCCTGCGAAGAAAATGTGCTGCAGACTGCATCTTTGCACCCTACTTTTGTTCCCAACAAGGAGCTGCTAGATTCGCCGCCATTCATAAGGTTTTCGGGGCTAGCAACGTTTCCAAGCTGCTCTTGCGTATACCAGATAACGATCGTTTTGAGGCAATGGTCACCATCGCTTATGAAGCCCAAGCTCGCATCAGAGACCCTGTTTACGGTTGTGTCTCCCATATATTCGCCTTGCAACAACAGGTAGCAAGCTTGCAGGCACAGCTAGCGCAAATGAAGGCGCAGGTGGATCAGAACCAGATGGTGTGCAGAAACTTGGAGAATCATTGGTCAGAGAATGTTGGACAACCATTCAATCCATTTTGCCCCACTTCCATGAATAACCCTATATCTCCTCAGAGCTCACTTGATTCAATTGATTACAGCAGCAATATGAATGATGGAATGAGCACGCAAGATGTACAAAGCGGAGAGGATTTCTCATTCCAAGCCTGTTCTAGGAAAATATCATATAACAATGACTTGGGTGAGCTGCAAGAATTGGCACTCAGAATGATGAGGAAGTGTGATTAG 645 0.4636 MASATTANDAASGSSFGSPCGACKFLRRKCAADCIFAPYFCSQQGAARFAAIHKVFGASNVSKLLLRIPDNDRFEAMVTIAYEAQARIRDPVYGCVSHIFALQQQVASLQAQLAQMKAQVDQNQMVCRNLENHWSENVGQPFNPFCPTSMNNPISPQSSLDSIDYSSNMNDGMSTQDVQSGEDFSFQACSRKISYNNDLGELQELALRMMRKCD* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00739 214 ProSiteProfiles LOB domain profile. 18 120 IPR004883 -
Lapu7g00739 214 Coils Coil 99 133 - -
Lapu7g00739 214 PANTHER LOB DOMAIN CONTAINING PROTEIN 15 175 - -
Lapu7g00739 214 Pfam Lateral organ boundaries (LOB) domain 19 117 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00739 Lapu-Chr7 8700551 8701777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00739 4 211 AS2 family AT2G42430 52.439 3.67e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu7g00739 LOB 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00739 K13944 - gmx:100776145 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00351 6 3413734 3415075 Lapu7g00739 7 8700551 8701777 PCT