Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00735 ATGGAATTCAGCTGCCAAGAAGATTCCAAAAGCTCCAGCGAAGAAATCGATCGATCATCCGAACAGAATGATGAGATGGGCACTGGCAGATCCTACGAGTGTGTCTTTTGCAAGAGAGGCTTCACCACTGCACAGGCTTTGGGTGGACACATGAACATACACAGAAAAGATAGGGCCAACAAGGCCAAACCCAATTTTCCTCCTTCCAGTTCAACCAAGGTTGATGACACTAATAGCTATGCAGATCTCGGGTTTTACTCTCCATCAAATCCCACCTATCTTGCAAGAGGGAGTTACTATTCCACTCTTCCTGAACCAGAGGTAGACATTAATTACAACTACTACCATCAATTATATTTTCCCTCGCACGCTTGTGGTACCAAATCACCTTCACATGTACAATATAGTGAGGTTTTGTGTGTAGAGAACCAAAGGGATCCTCAGCTTCTGTTTGGACAAGATTGGAGGCAAAGGGGTTTGAGTTTGTACACCAACCCACTATGTGTACATGAAAATAAAGACAAGATACAAAACAACAGTGAAGAGGACGATCTGGATTTGGAGCTTAGACTTGAAAGATGGGTTACAAGTTGGAAGCAGAAAGAAGCAAGATTTCTATAG 621 0.43 MEFSCQEDSKSSSEEIDRSSEQNDEMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRANKAKPNFPPSSSTKVDDTNSYADLGFYSPSNPTYLARGSYYSTLPEPEVDINYNYYHQLYFPSHACGTKSPSHVQYSEVLCVENQRDPQLLFGQDWRQRGLSLYTNPLCVHENKDKIQNNSEEDDLDLELRLERWVTSWKQKEARFL* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00735 206 Pfam C2H2-type zinc finger 32 56 - -
Lapu7g00735 206 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Lapu7g00735 206 MobiDBLite consensus disorder prediction 48 75 - -
Lapu7g00735 206 MobiDBLite consensus disorder prediction 1 27 - -
Lapu7g00735 206 MobiDBLite consensus disorder prediction 7 24 - -
Lapu7g00735 206 Gene3D Classic Zinc Finger 5 83 - -
Lapu7g00735 206 PANTHER OS07G0101800 PROTEIN 1 192 - -
Lapu7g00735 206 SUPERFAMILY beta-beta-alpha zinc fingers 30 59 IPR036236 -
Lapu7g00735 206 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00735 Lapu-Chr7 8656892 8657665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00735 32 94 C2H2 Transcription Factor Family AT5G43540 52.239 1.65e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lapu7g00735 zf-C2H2_6 1.9e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00735 - - ccaj:109812060 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00735 7 8656892 8657665 Lapu7g00735 7 8656892 8657665 ECH
Lapu6g00347 6 3379054 3379904 Lapu7g00735 7 8656892 8657665 PCT