Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00726 ATGACAGACATATTTGAAAACCAACCATCACCTGATTCTTCAAATTATGCCTCAAGCAGTGGCTTCTCTATGGACGATAAGGAGGTTGGATATAGAGCTGCAACATCAAAACATATATATCTTTTGGCCAACAAATCTTCTCTCCACTTCTTGTCCGTCAAAATTGACCTGAATTATGCTCGCATGGTAATGGCAGAGATGGTGGGTACTTTTATTTTGATGTTCTGTGTATGTGGAATTAGTGCAAGCACACAATTTCAAAAGGGTGCAGTGGGCCTTCCAGAGTATGCAGCTACAGCAGGGTTAACAGTGGTGGTGATAATTTTCTCTATAGGGCCAATATCTTGTGCGCACGTTAACCCAGCTGTCACAATAGCCTTTGCTACAATGGGTCAATTTCCATGGTTCAAGGTTCCAGTTTACATAATAGCACAGACAGTAGGTTCTATGTCGGCAACATACATAGGTAGCCTTGTATACGGCATAAAATCAGATGCTATCATGACCATGCCACTCCAAGGGTGCACCTCTGCCTTCTGGGTGGAGCTTATTGCAACTTTCATCATCATGTTCCTCATTGCAGCTTTGACATCTGAATCTCAATCAGTGGGCAATTTATCTGGCTTTGTAGCTGGTATAGCAATTGGGCTTGCTGTGCTAATCACAGGCCCGGTTTCAGGTGGATCAATGAATCCTGCAAGATCATTAGGTCCAGCAATTCTGTCATGGAAGTTTAAGAACATATGGATATACATGGTAGCCCCCAGTGGCGGAGCCGTGGCAGGAGCTGCAATGTTTCGTTTCCTACGCCTTCGAGACCAACATTCTACTACTTTGTTCTCCCCAAACATCAATGATGTTGGTCGTCCCATACCCTTTTGCTCAAGTTAG 891 0.4388 MTDIFENQPSPDSSNYASSSGFSMDDKEVGYRAATSKHIYLLANKSSLHFLSVKIDLNYARMVMAEMVGTFILMFCVCGISASTQFQKGAVGLPEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATMGQFPWFKVPVYIIAQTVGSMSATYIGSLVYGIKSDAIMTMPLQGCTSAFWVELIATFIIMFLIAALTSESQSVGNLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKNIWIYMVAPSGGAVAGAAMFRFLRLRDQHSTTLFSPNINDVGRPIPFCSS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00726 296 MobiDBLite consensus disorder prediction 1 21 - -
Lapu7g00726 296 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Lapu7g00726 296 SUPERFAMILY Aquaporin-like 57 276 IPR023271 -
Lapu7g00726 296 Gene3D Glycerol uptake facilitator protein. 26 279 IPR023271 -
Lapu7g00726 296 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g00726 296 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g00726 296 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g00726 296 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g00726 296 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g00726 296 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g00726 296 Pfam Major intrinsic protein 59 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu7g00726 296 PANTHER AQUAPORIN NIP2-1 45 274 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00726 Lapu-Chr7 8492313 8494402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00726 61 274 Major Intrinsic Protein MIP AT5G37820 40.930 4.85e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00726 K09874 - gmx:100817660 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00726 7 8492313 8494402 Lapu7g00726 7 8492313 8494402 ECH
Lapu6g00337 6 3235357 3239604 Lapu7g00726 7 8492313 8494402 PCT