Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00711 ATGGAAGCTGGTCTTATGAAGGGGAAGATGGTGTTTGAGGAAACTGAACTCAGGCTGGGACTTGGACTGCCTGGAAATGGAACCACAGCAACTGAAGCAGAAGGAGTGAGGAAGAGAGGATTCTCTGAGACTGAGACTGAAACAACCACAGTTGATTTGATGCTTAACCTCTCCCCCAAGGAAGCTGCTTCTGCTGATAGAGCAGATCCACGTGGTATGCCAAAGACTTCGCCAAAGGAGAAGACCCTTTTGCTTTCCGATCCCTCCAAACCTCCTGCTAAGGAACAAGTGGTGGGATGGCCACCAGTGAGGTCTTTCCGGAAGAACATGTTTGCAGCTCAAAAGAGCATGGTAGAGGAAAGCGAGAAGAACAGCCCTAATGCAAGCTTTGTGAAAGTTAGTATGGATGGAGCACCTTATCTCCGCAAGGTGGACTTGAAAATGTACAAGAGTTACCCAGAGCTCTCTGATGCCTTAGGAAAAATGTTTAGCTCCTTCACCATTGGAAATTGTGAATCCCAAGGTTTCAAGGATTTCATGAACGAGAGCAAGTTGATGGATCTTTTGAACAGCTCGGACTGTGTACCGACCTATGAAGACAAGGATGGTGACTGGATGCTTGTCGGTGATGTTCCATGGGAGATGTTTGTTGAATCATGCAAGCGTTTACGTATCATGAAAGGAAAGGAAGCTATTGGACTGGCACCAAGAGCCATGGAGAAATGCAAGAACAGGAGCTAG 741 0.4696 MEAGLMKGKMVFEETELRLGLGLPGNGTTATEAEGVRKRGFSETETETTTVDLMLNLSPKEAASADRADPRGMPKTSPKEKTLLLSDPSKPPAKEQVVGWPPVRSFRKNMFAAQKSMVEESEKNSPNASFVKVSMDGAPYLRKVDLKMYKSYPELSDALGKMFSSFTIGNCESQGFKDFMNESKLMDLLNSSDCVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00711 246 Gene3D - 122 240 - -
Lapu7g00711 246 Pfam AUX/IAA family 14 237 IPR033389 -
Lapu7g00711 246 MobiDBLite consensus disorder prediction 23 97 - -
Lapu7g00711 246 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 233 IPR003311 GO:0005634|GO:0006355
Lapu7g00711 246 SUPERFAMILY CAD & PB1 domains 123 227 - -
Lapu7g00711 246 ProSiteProfiles PB1 domain profile. 128 228 IPR000270 GO:0005515
Lapu7g00711 246 FunFam Auxin-responsive protein 123 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00711 Lapu-Chr7 8302756 8306178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00711 120 231 B3 DNA Binding Superfamily AT3G61830 33.929 4.97e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lapu7g00711 AUX_IAA 2.4e-81 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00711 K14484 - gmx:100780214 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00326 6 3098340 3100404 Lapu7g00711 7 8302756 8306178 PCT