Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00704 ATGGCCCATCAGATCAAAGATATCAACACCAGGTTGGCCAAACTTGCAGCTCAAAGAAGCATGTTTGGCCTTCAAGTAATTGACCAAGACACACGTGTCGTGCATGTGAGGGAAATGACTCATTCTCATGTAAACCCTTCCAATGTTATAGGAAGGGACCTTGCTAAACAGATAATAGTAAAACTTTTGGTAGAAGATGGTCATCACGAAAGTCTCTCTGTTATTCCCATTGTGGGAATGGGAGGCTTGGGAAAGACCACCCTTGCTAAGTTAGTGTTCGATGACACAAGCATTGATGCATGTTTTCCTTTGAAAATGTGGGTATGTGTCTCTAATGACTTTGAACTTAAGAATGTGCTCGTCAAAATTCTTAATTCTTATCCAAACCCAACTAGGGAAAACTTCAATAACTTTGAGATAGAGCAACTTCAAAATCATTTGAGAAATACAATTCAAGGTCAGAAGTTGTTGCTTGTGCTGGATGACGTGTGGAATGAGGATCGTGCAAGATGGGAAGAGTTAAAGGAAATAATAGATGTTGGTGTTGAAGGAAGTAAAATTTTGGTCACTACTCGTAGCTATGCAGCAGCTACCATGATGCGCACTAAATTCTCATACTACTACCTTTTAGAACGCCTCTCTGAAGAGGATTCTCTTTCTCTATTTTTGAAATCTGCTTTTGAAGATGGAGAAGAGAAAAATCATCTACAACTATTGGAGATTGGGAAAGAGATCGTAAAAAAATGTGGAGGATTACCTCTGGCGGTGAAAACATTGGGGAGTTCATTGTTCTTGAGGGCTAATAAAAAAGAGTGGGAATCTATAAGAGACGATGAGATTTGGAATTTGAAACAAAATGAAAAAGGCATTTTGCCTGCTCTCAAATTAAGCTATGATCAACTGCCTTCATATCTAAAACCATGTTTTGCTTCATTCTCTCTTCTCCCAGAGAACACTCATATTTTAAGTTCTCAAATTTCTTTGTTGTGGGGAGCACTTGGTTTTCTGCCAGCACCAAAGGCAAGTGAATCAATGATTGATGTTGCCACTCAATTTTTGCATGAGTTATGGTCAAGATCTTTTCTTTCAGAATATTATGACATCGGGGTAGATTGCATGTTTAGATTACATGATTTGATGGCTGATCTTGCGGTGTATATTGCGAAAGGTGAGTTTGAAATAATAGATTCCCATAATCCAAAATTTTCTGAGAATGCTCAGCATTTAACAATTAAGGAAAATAAATTGCTTGGTCAAGCTCTTCTTCCCACAAGTCTGAGAACTATCACTTTTCCTGTTAGAGCCAATAATGAAGATTTCTTAAATACATTGGTGTCTAATTGCAAATACTTGAGGGTTTTAAACTTGGAACTTTCTGAATACGAGAGTCTACCTCGTTGTATCGGAAAGTTGAAACATTTAAGATTTCTCAATCTTACATGTAGTGCAAAACTTGAGGAACTCCCTGATTCAGTTTGCAAACTTCAAAGTTTGCAAACTTTGATGCTTACAGGATGTGTAAAGCTACAAAAGTTACCCACAGGATTAAGAAATCTGATAAGCCTTCCTTGA 1572 0.3766 MAHQIKDINTRLAKLAAQRSMFGLQVIDQDTRVVHVREMTHSHVNPSNVIGRDLAKQIIVKLLVEDGHHESLSVIPIVGMGGLGKTTLAKLVFDDTSIDACFPLKMWVCVSNDFELKNVLVKILNSYPNPTRENFNNFEIEQLQNHLRNTIQGQKLLLVLDDVWNEDRARWEELKEIIDVGVEGSKILVTTRSYAAATMMRTKFSYYYLLERLSEEDSLSLFLKSAFEDGEEKNHLQLLEIGKEIVKKCGGLPLAVKTLGSSLFLRANKKEWESIRDDEIWNLKQNEKGILPALKLSYDQLPSYLKPCFASFSLLPENTHILSSQISLLWGALGFLPAPKASESMIDVATQFLHELWSRSFLSEYYDIGVDCMFRLHDLMADLAVYIAKGEFEIIDSHNPKFSENAQHLTIKENKLLGQALLPTSLRTITFPVRANNEDFLNTLVSNCKYLRVLNLELSEYESLPRCIGKLKHLRFLNLTCSAKLEELPDSVCKLQSLQTLMLTGCVKLQKLPTGLRNLISLP* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00704 523 PANTHER DISEASE RESISTANCE PROTEIN RP 2 522 IPR044974 GO:0006952
Lapu7g00704 523 SUPERFAMILY L domain-like 375 522 - -
Lapu7g00704 523 Gene3D - 31 206 IPR027417 -
Lapu7g00704 523 Gene3D - 212 302 IPR042197 -
Lapu7g00704 523 PRINTS Disease resistance protein signature 74 89 - -
Lapu7g00704 523 PRINTS Disease resistance protein signature 493 509 - -
Lapu7g00704 523 PRINTS Disease resistance protein signature 249 263 - -
Lapu7g00704 523 PRINTS Disease resistance protein signature 150 164 - -
Lapu7g00704 523 FunFam Probable disease resistance protein At1g61300 31 204 - -
Lapu7g00704 523 Pfam NB-ARC domain 59 299 IPR002182 GO:0043531
Lapu7g00704 523 Gene3D - 304 385 IPR036388 -
Lapu7g00704 523 Gene3D Ribonuclease Inhibitor 423 523 IPR032675 -
Lapu7g00704 523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 310 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00704 Lapu-Chr7 8232795 8242935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00704 72 337 WRKY Transcription Factor Family AT5G45050 27.839 5.48e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00704 - - vra:106771654 782.326