Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00695 ATGGCAGACCCTTACTCCAATTTCTTCTCACCACCTTTCTACCACTACCCCTCTCCAAACCCTTCACCCCACCACCATCCATATGCTCACAACTTCATCAACCAAACCACCACCACCACTGCCACCAACATCAGCCACAACACCTTTTTCCACTTTCAACACCACCACCACCACTTTCAAGCCACTACCACTTCTTGTTCTTCTTCACCCCCTTCCCCTCCCTTGAGAGAGGCCCTTCCCCTTCTCAGTCTCAGTCCAAAAAATGACGAGGAACAAGAGGAGGAGTACCAGGACCAGGATCAGGTTTGCACCGCCATGGATGTGGAAGAGGAGTATACTAGGACCCTCCATAACCCCAAAGATGAGGAGCAAGAGGAGGATGGTGATAACAGTGTCACTGTTGCACTGCACATAGGGTTGCCAAGCCCTAGTGCTGCTGAGATAGCTTCTGTGATGTCTTCAGCCTGTGCCACAGACAAAGAACAACAACAAAGAGGAGGAGATTGTAATAATAATGGGAGTGAGGATTCTTCTTCAGGGTTCTTGTCCAACAGGCTCAACAAGGGACAGTACTGGATCCCTACACCTTCTCAGATTCTCATTGGTCCTACACAGTTCTCTTGTCCTGTTTGTTGCAAAACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCACAGTACAGAAAAGGGCCTGAATCTCTGAGGGGTACCCAACCAACAGGTATGCTTAGGCTTCCATGCTATTGTTGTTCCCCGGGATGCAGGAACAACATTGATCACCCAAGAGCAAAGCCCCTCAAAGATTTCAGGACTCTTCAAACACACTACAAGAGGAAGCATGGAATTAAGCCCTTCATGTGTAGAAAATGTGGTAAGGCTTTTGCAGTGAGAGGTGATTGGAGAACCCATGAAAAGAACTGTGGGAAGCTTTGGTACTGCATCTGTGGCTCTGATTTCAAGCACAAGAGGTCTCTTAAAGATCATATCAAAGCTTTTGGAAGTGGCCATGCAGCTTATGGGATCGATGGCTTTGAAGAAGAAGAAGAGCCTGCATCTGAAGTAGAACAAGACAATGACTAA 1095 0.474 MADPYSNFFSPPFYHYPSPNPSPHHHPYAHNFINQTTTTTATNISHNTFFHFQHHHHHFQATTTSCSSSPPSPPLREALPLLSLSPKNDEEQEEEYQDQDQVCTAMDVEEEYTRTLHNPKDEEQEEDGDNSVTVALHIGLPSPSAAEIASVMSSACATDKEQQQRGGDCNNNGSEDSSSGFLSNRLNKGQYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGIDGFEEEEEPASEVEQDND* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00695 364 Gene3D Classic Zinc Finger 268 343 - -
Lapu7g00695 364 MobiDBLite consensus disorder prediction 156 181 - -
Lapu7g00695 364 ProSiteProfiles Zinc finger C2H2 type domain profile. 290 310 IPR013087 -
Lapu7g00695 364 Gene3D Classic Zinc Finger 205 228 - -
Lapu7g00695 364 SUPERFAMILY beta-beta-alpha zinc fingers 272 310 IPR036236 -
Lapu7g00695 364 ProSiteProfiles Zinc finger C2H2 type domain profile. 206 233 IPR013087 -
Lapu7g00695 364 SMART c2h2final6 206 228 IPR013087 -
Lapu7g00695 364 SMART c2h2final6 290 310 IPR013087 -
Lapu7g00695 364 ProSitePatterns Zinc finger C2H2 type domain signature. 208 228 IPR013087 -
Lapu7g00695 364 FunFam Zinc finger protein WIP2 259 341 - -
Lapu7g00695 364 PANTHER ZINC FINGER PROTEIN WIP2 35 362 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00695 Lapu-Chr7 8110122 8112648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00695 1 364 C2H2 Transcription Factor Family AT3G57670 60.660 5.84e-147 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lapu7g00695 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00695 - - gmx:100783088 570.081