Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00693 AAAGTATCTAGCTCTCTATTTTCCAATGTCAATTTCTTGCGCGAATCACAGATCACATCAGCTATCAACACCCTGACCACACTTTCCCTTCTTAATTTTTTTCCTTCTTTCTTCTATTTCCTTTCTTCTATCTTATCATCTCTTTCTAGGGTTTTTTCCTTCCCCCAATTTCACCATGTTTTTCCACTGCCTCCGATTAGGGTTCAGGCAACCATGGTCGATGCTCCCGCGAGTCCAGGCGGCAGTAGTAGCCACAAGAGCGGCCAGCACACTCCCCTCTCCAATTTCTGTGAGCAGGACCGCTTCCTCCCCATCACTAACATTAGTCGCATCATGAAGAAAGTTCTTCCCGACAATGACAAAATTTCCAAGGACGTCAAGGAAACCCTGCAGAAATGTGTATCCGAGTTCATCAGCTTCATCACCAAGATAGCTATAAGTGCCAGAGAGAGAAGAGAAAGACCGTCGCAGCTGGCCAGCTGGCAGAACAGCGGCAACCCGAACGGGTAA 510 0.4706 KVSSSLFSNVNFLRESQITSAINTLTTLSLLNFFPSFFYFLSSILSSLSRVFSFPQFHHVFPLPPIRVQATMVDAPASPGGSSSHKSGQHTPLSNFCEQDRFLPITNISRIMKKVLPDNDKISKDVKETLQKCVSEFISFITKIAISARERRERPSQLASWQNSGNPNG* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00693 169 Gene3D Histone, subunit A 90 156 IPR009072 GO:0046982
Lapu7g00693 169 SUPERFAMILY Histone-fold 80 146 IPR009072 GO:0046982
Lapu7g00693 169 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 87 147 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lapu7g00693 169 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 102 152 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00693 Lapu-Chr7 8076270 8080643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00693 78 154 CCAAT-HAP3 Transcription Factor Family AT2G37060 59.494 7.32e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00693 K08065 - gmx:100791435 112.849