Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00685 ATGGCTGCGCCACTAGGCAATAGGCTTCAAAGCATGTTGCAGGCTGCGGTGCAATCTGTTCACTGGACTTATAGCCTCTTCTGGCAACTTTGTCCACAACAAGTGATTCTGGTTTGGGGTGATGGGTACTACAATGGGGCAATCAAGACTAGGAAAACGGTGCAACCAATGGAGGTGAGTGCTGAGGAGGCATCTCTCCAAAGAAGCCAGCAACTTAGAGAACTCTATGAATCACTGTCTGCCGGAGAGACAAATCCGCCAACTCGCCGGCCTTGCGCTGCCTTGTCACCGGAGGACCTAACAGAATCTGAATGGTTTTATTTGATGTGCGTCTCATTCTCCTTTCCTCCTGGTGTTGGGTTGCCTGGAAAGGCATATGCTAGGAGGCAGCATGTTTGGCTCACTGGTGCAAACGAGGTCGACAGTAAAACATTTTCACGAGCTATTCTAGCCAAGAGTGCTCGAATACAGACAGTTGTGTGCATTCCTTTATTAGACGGCGTGGTTGAGTTTGGTACAACGGATAAGGTTCAAGAAGACCTTAACTTCATCCACCACGTGAAGACATTCTTCACAGAACACCACCACCCTCTGCCGCCCAAGCCCGCCCTCTCCGAGCACTCAACGTCTAACCCCATCTCCTCCTCCGACCACATCCCCACCATCATGTACACTGTAGAAGACCCACTCGCCGCGAATCCTTCCCAGAACGACGACATGGACGAAGATGAAGAGGAAGAGGAGGAGGAGGAGGAGGAAGACGAGGAGGAAGAGGAGGAGGCGGAGTCCGCCTCCGAGGACGAAACCGGAGGCCGTCTTGCCCGCCCGGTCTTGACGCCTGAAATGGAGGGTGTTACGGCGGCGGAGCCCAGCGAACTGATGCAGCTGGAGATGCCGGAGGATATCCGGGTCGGATCTCCGAACGACGGGTCAAACAACTTGGACTCGGACTTCCATTTGCTAGCGGTGAGTCAAGGAGGGAACGCGGCGGGGCAGGCTGAGTCGAGCCTGAGATGGGGCCCGAGTCAAGAGTCATTACAAGTTCAACTACCGGCTTCAGCCTCTCATCTATTGGAAGACTTGACCCAAGAGGACACTCACTACTCTGAAACCGTATCCAACATCCTCCAAAACCAGTCCAGCCGGTGGCCTGCCTCGCCGACCTCCGTTGGCTACATCACATACTCCACGCATTCAGCTTTTGCAAAGTGGAGCACCCGCGCCAGCCACCTCTTCCACCCCGCCGTTGACGGCCCCAGCCAGTGGCTCCTCAAGTACATTCTCTTCACGGTCCCTTACCTCCACGCCAAGAACCCCGCCGACACTTCTCCCCAAACCGCCGCCGACCCCAAGCTGCGCGGAAAAGGAACGCCGCAGGATGAGCTGAGCGCCAACCACGTGCTCGCGGAGCGCCGCCGCCGCGAGAAGCTGAACGAGCGGTTCGTAATCCTGCGGTCACTGGTCCCCTTCGTCACGAAAATGGACAAGGCATCCATTCTGGGTGACACCATCGAGTATGTGAAGCAGCTGCGGCGGAAGATCCAGGAGCTGGAGGCGCGTAACCGCAACACTGAGGCGGAACACCGTTCCAAGCTCCCTGAGGTAACGGTTCAAAGGACGAGTAGCAATTCGAGCAAGGAGCAGCAGAGGAGTGGGGTGACGGTGATGGAGAAGAGGAAGGTGAGGATCGTGGAAGGGGTGGCGGCGAAGGCGACGGCGGTGGAGGCTGAGGCGGCAACATCAGTGCAAGTTTCGATCATTGAGAGCGATGCACTGTTGGAGATCGAGTGCCTCCACAGAGAAGGGTTGCTTCTTGACGTGATGCAGATGCTGAGGGAGGTGAGGATAGAGGTTATTGGGGTGCAGTCATCACTTAACAATGGGGTGTTCATGGCGGAGTTGAGGGCTAAGGTGAAGGAACATGCGAACGGGAAGAAGGTGAGCATTGTGGAAGTGAAGAAGGCACTTAACCAAATCATTCCCCACGCTGTTCATTGA 1998 0.5571 MAAPLGNRLQSMLQAAVQSVHWTYSLFWQLCPQQVILVWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYESLSAGETNPPTRRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKAYARRQHVWLTGANEVDSKTFSRAILAKSARIQTVVCIPLLDGVVEFGTTDKVQEDLNFIHHVKTFFTEHHHPLPPKPALSEHSTSNPISSSDHIPTIMYTVEDPLAANPSQNDDMDEDEEEEEEEEEEDEEEEEEAESASEDETGGRLARPVLTPEMEGVTAAEPSELMQLEMPEDIRVGSPNDGSNNLDSDFHLLAVSQGGNAAGQAESSLRWGPSQESLQVQLPASASHLLEDLTQEDTHYSETVSNILQNQSSRWPASPTSVGYITYSTHSAFAKWSTRASHLFHPAVDGPSQWLLKYILFTVPYLHAKNPADTSPQTAADPKLRGKGTPQDELSANHVLAERRRREKLNERFVILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQELEARNRNTEAEHRSKLPEVTVQRTSSNSSKEQQRSGVTVMEKRKVRIVEGVAAKATAVEAEAATSVQVSIIESDALLEIECLHREGLLLDVMQMLREVRIEVIGVQSSLNNGVFMAELRAKVKEHANGKKVSIVEVKKALNQIIPHAVH* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00685 665 MobiDBLite consensus disorder prediction 522 552 - -
Lapu7g00685 665 Gene3D - 462 533 IPR036638 GO:0046983
Lapu7g00685 665 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 461 510 IPR011598 GO:0046983
Lapu7g00685 665 MobiDBLite consensus disorder prediction 237 265 - -
Lapu7g00685 665 Pfam Helix-loop-helix DNA-binding domain 464 511 IPR011598 GO:0046983
Lapu7g00685 665 PANTHER TRANSCRIPTION FACTOR TT8 7 661 - -
Lapu7g00685 665 MobiDBLite consensus disorder prediction 535 551 - -
Lapu7g00685 665 MobiDBLite consensus disorder prediction 197 218 - -
Lapu7g00685 665 MobiDBLite consensus disorder prediction 440 459 - -
Lapu7g00685 665 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 191 IPR025610 -
Lapu7g00685 665 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 463 530 IPR036638 GO:0046983
Lapu7g00685 665 MobiDBLite consensus disorder prediction 204 218 - -
Lapu7g00685 665 MobiDBLite consensus disorder prediction 230 292 - -
Lapu7g00685 665 SMART finulus 467 516 IPR011598 GO:0046983
Lapu7g00685 665 Coils Coil 500 527 - -
Lapu7g00685 665 Coils Coil 233 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00685 Lapu-Chr7 7974133 7988347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00685 303 662 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 36.712 2.17e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu7g00685 bHLH-MYC_N 9.4e-53 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00685 - - gmx:100786815 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00654 6 6843091 6845275 Lapu7g00685 7 7974133 7988347 PCT