Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00675 ATGGAAGAGCAAAGTAACCATGAGAGCCCTGCGCAACTAACATCCTGTGACACTGGGGGAACAACCAATGATGCCTCTCATTCAGCTGAGGGTCATCTCCTTCCCAACCCAAAATTTGTCATTGCAGCATCATCTGGAAGAAGTGAGAGCCACTGGACTTGCTTTCCAAAACCATCTCATAACTACGTTGAGTATCTTTCAGAATCCTCAACTTATCTGCCAAACACTTCCACTGATTACATGATGGGGGGTAGTTATCTACCTGTTGGCACCATCAATGATGGTAATGCGGTTAATGGATCAGACAGAAACTTCTTTTACAATGATCCAGGAAAAGTCTGTGCCTTTAAGCCTATTGGTTCTTCAAGTAATGACCTTGACATTAAGAAGCAGGTGGGCTTTTGGAGAGCTGATGAAGGAGAGGAAGTAATTAAAGTTGAAACTGAAAGTAGTCAAAGTTTTCTTTATGCTGAGAGCCATGCTTTATGGACTGCAGATTCTCTTGTAGATAAGCATAATGCTTTGCAAGATCCAATGGTAATGGTTGGTGCACCTGCTTTACTTCCCAAACCAGGATGCAGCTCCTCAAAAGAGAAAGCACGTGTGACTGACCGTCAACGCAGGCAACGTATCTCTGATAACCTCAAAGCCTTACACGAATTGCTTCCAAATCCAGCAGAGGGAAGTCAAGCGTACATACTGGACGATATTATTGACTATGTCAAATATTTACAGCTTCAAATAAAGGAACAAAGTGGAAGTAGATTGCAAGAGGAATCAACTGCTATACCACTTGTTTTTCATGAGGGTTACGGTCATTATATCAACCAACAGATGCTGAATGAACCCCTTGAGGAGATAATGGGGAAACTACTTGAAGAACATTCTGCAGCAGCTGGTCAGCTACTAGAGAGTAAGGGTCTTTTCCTGCTGCCTATGGCTTTGGTTGATGAGTTGAGTGAGGCTATGCAAATGTTTGGTGAGAGTGCCCTAGTCTGA 999 0.4304 MEEQSNHESPAQLTSCDTGGTTNDASHSAEGHLLPNPKFVIAASSGRSESHWTCFPKPSHNYVEYLSESSTYLPNTSTDYMMGGSYLPVGTINDGNAVNGSDRNFFYNDPGKVCAFKPIGSSSNDLDIKKQVGFWRADEGEEVIKVETESSQSFLYAESHALWTADSLVDKHNALQDPMVMVGAPALLPKPGCSSSKEKARVTDRQRRQRISDNLKALHELLPNPAEGSQAYILDDIIDYVKYLQLQIKEQSGSRLQEESTAIPLVFHEGYGHYINQQMLNEPLEEIMGKLLEEHSAAAGQLLESKGLFLLPMALVDELSEAMQMFGESALV* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00675 332 CDD bHLH_AtbHLH_like 203 250 IPR045239 -
Lapu7g00675 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Lapu7g00675 332 SMART finulus 201 250 IPR011598 GO:0046983
Lapu7g00675 332 MobiDBLite consensus disorder prediction 1 32 - -
Lapu7g00675 332 Pfam Helix-loop-helix DNA-binding domain 197 245 IPR011598 GO:0046983
Lapu7g00675 332 Gene3D - 194 263 IPR036638 GO:0046983
Lapu7g00675 332 MobiDBLite consensus disorder prediction 7 29 - -
Lapu7g00675 332 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 51 315 - -
Lapu7g00675 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 255 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00675 Lapu-Chr7 7788058 7790028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00675 202 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 39.837 2.64e-20 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu7g00675 HLH 5.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00675 - - gmx:100788949 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00675 7 7788058 7790028 Lapu7g00675 7 7788058 7790028 ECH