Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00674 ATGACCATCTCAATGTTCATGTGCAGATTAAGACAACCCATAATAAACATTCCTTGCAGTGGGAAAAAACTGAATGTCAGGCAAATTGAGAAAGAGAAAGTAGTGGTTGTAATGGGCGCAACAGGGACAGGGAAGTCAAGGCTGTCGATTGACCTAGCCACATGTTTTCCATCAGAAATCATAAACTCCGACAAAATTCAAGTCTACCAAGGTCTCGACATAGTCACAAACAAAATCCCAAAGGAGGACCAACGTGGGGTGCCACACCACTTACTAGGAACAATAAACCCCAACATAGACTTCACACCCAATGATTTCATTGACACGTCATCATCGGCCATTGACACCATCACCAGTGCCCAGAAGCTTCCAATCATCGTTGGCGGCTCCAACTCGTATCTCGAGGCCTTGATCGACGACGACGATTACAAGTTCCGGTCGCGCTACGATTTTCTCTGCCTCTGGGTTGACGTGGCAATGCCCGTGCTTCAATCCTACGTGGCGGAACGGGTTGACGACATGTTCCGTAACCGAATGGTGGATGAACTGAGACCCTTTTACAGTCCCAACGGCGATTACTCGAGAGGGATTAGAAGAGCCATTGGGGTTCCTGAATTTGACGAGTACTTTGGGAGAGAGGAGTTTGTTGACGAGGAAACGAAACAGAGGTTGTTGGAACATGCTATTAAGGAAATGAAATTGAACACGTGCAAACTTGCCATGAAACAGTTGGGGAAGATTCACAGGCTGAGGAACGTTAAGAGATGGGAGATTCATCGGTTGGACGCCACGCCCGTGTTTCGAAGGCGTGGGGAAGAAGCGAACGAGGCGTGGAAGAAGGTCGTGGCGGAACCTAGTGCTATGGTCGTTGCCCGCTTTCTCTATAACTCCAAAAACAACGCCAACGTTGTTTCTGGACTTAGAGTGTTGCCACCTTCAGAGAATGTTATGGCTGCGGCAACGTGCTAA 969 0.4819 MTISMFMCRLRQPIINIPCSGKKLNVRQIEKEKVVVVMGATGTGKSRLSIDLATCFPSEIINSDKIQVYQGLDIVTNKIPKEDQRGVPHHLLGTINPNIDFTPNDFIDTSSSAIDTITSAQKLPIIVGGSNSYLEALIDDDDYKFRSRYDFLCLWVDVAMPVLQSYVAERVDDMFRNRMVDELRPFYSPNGDYSRGIRRAIGVPEFDEYFGREEFVDEETKQRLLEHAIKEMKLNTCKLAMKQLGKIHRLRNVKRWEIHRLDATPVFRRRGEEANEAWKKVVAEPSAMVVARFLYNSKNNANVVSGLRVLPPSENVMAAATC* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00674 322 Pfam IPP transferase 145 244 - -
Lapu7g00674 322 Pfam IPP transferase 67 140 - -
Lapu7g00674 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 142 IPR027417 -
Lapu7g00674 322 Gene3D - 31 294 IPR027417 -
Lapu7g00674 322 FunFam Adenylate isopentenyltransferase 5, chloroplastic 160 258 - -
Lapu7g00674 322 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 293 IPR039657 -
Lapu7g00674 322 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 160 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00674 Lapu-Chr7 7781176 7782178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00674 147 294 C2H2 Transcription Factor Family AT2G27760 30.286 1.13e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00674 K10760 - gmx:100803964 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00674 7 7781176 7782178 Lapu7g00674 7 7781176 7782178 ECH