Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00655 ATGACTCCTCTGAACCCCTTCATCCTCCATCTCTTGCTCTTCTTCTTCCTCTACTTCCTTTCTCTCCCATTCTCTTCCTTATCCACCTGTCCCCTCAACTTCACCGTCCTCGGCACCAACAAACCCTCCTCCTTCGACTCCTCCCGCTGCCAGGTCATCACCCAAGCCCTCCGCCTCGTCCAGTCCGACTACCTCCGCCGCAGCGGCTTCTTCCTCGCTCCCTCCAACTCCTCCACCTCCTGCTGGGCAAGCTTCCAGTCCTACGTTAACCGCTTCGACCCCTCCTACGACATTCGCTCCTCCTGCGGCTACAACACCTCCTGGATCTCCCAAGGCTGCGTCAACGTCACCACCCAACAAGACTTCGAAGCCCTGGTTCCCCCGTCCGCGCTTCAGACCATCCGAAAAAACTGCAACCAATCGCTCGAGAATAACTCCCCCTGCGCCCTCTGCACCTTCTCCTTCTCCGGTGTCCCACACTTGGGACAGTCCGTCGGCAACCTCACCGGCTGCACTGACTACTCTTCTATCTACGCCGCCGCCTTCGCCAACGACCGTGGCCCCTCCGACCCCGGCACCGCTAAGTGCTTGTTCTCCCTCGAATTTTCCTCCACCAGTTCCTCCGCGGCCAAACGAAGAAAGCTTCTTTTTGCGCTTGTTTCTGTTGTCTCTGTCTTGGTCTTCTCCTTGCTGGCTCTCGGCTTTTGGGCTTATCTCAAGTTGGAAAAGAAGGTCGCTCGGGATAAGGATATTGGTATTACGGAAATCGGTTTGGTTTCTGGTTTGGACTCCATGGATCAGAGCACCACTTTGATCAGGTTCACTTTCGATGATATCAAGAAGGCAACTAAGAATTTCTCCCGGGATAACATAGTTGGAAGAGGGGGTTACGGCAATGTGTACAAAGGGTTGCTACCTGATGGGAGTGAGGTTGCGTTTAAGAGGTTCAAGAATTGTTCGGCTTCTGGTGATGCCAGCTTTACTCATGAGGTTGAGGTTATTGCTAGCGTGAGGCATGTTAACCTTGTTGCTCTGAGAGGCTATTGTTCTGTCACTACTCGTTTAGAAGGTTACCAGAGGATTATTGTTTGTGATATGGTGAAAAACGGGAGTCTCCACGACCATTTATTTGGTTCCAATGGGGTGAAACTGAGTTGGCCAATTCGTCAGCAGATTGCTCTAGGCACGGCTAGAGGGCTGGCTTATTTGCATTATGGGGCTCAGCCTGCTATCATTCATAGGGATATTAAAGCAAGTAATATACTTTTGGATGATAAGTTTGAAGCCAAGGTTGCAGATTTTGGACTGGCGAAGTTTAATCCCGAGGGGATGACGCATATGAGCACTAGGGTGGCTGGAACCATGGGGTATGTTGCTCCGGAATATGCTTTGTATGGACAGTTGACAGAGAGAAGCGATGTGTTCAGTTATGGGGTCGTGCTTCTTGAGCTTTTGAGTGGGAGGAAGGCGCTTCAGATGAACAATGATGGTCAACCTTCTGCTTTGACTGATTGGGCTTGGTCATTAGTTAGAACGGGAAAGGCTTTGGATGTAGTTGAAGATGGCATACCACAACCTGGTTCACCACAAGTCCTTGAGAAGTATGTGTTAATTGCTGTGCTTTGTTCTCATCCGCAGTTGTATGCTAGGCCAACAATGGATCAGGTTGTTAAAATGATGGAGACTGATGAATCAGTGCCCTCAATACCTGAACGGCCAATCCCTCTTGTTGCTGGGAGGCTTGATATTGAGAGATCTGTGAGCAGTAGTGGCTCTGGTCAGCTCTCTAGTCCAACGGGTTATCAAGCATATACTCTAGAAAGTGATAGCCAGGGTACTACTTCTAGAGAAGAAAGAAGCTCGAGCTCCAGGATTTTGAGTACAGATTGA 1890 0.5016 MTPLNPFILHLLLFFFLYFLSLPFSSLSTCPLNFTVLGTNKPSSFDSSRCQVITQALRLVQSDYLRRSGFFLAPSNSSTSCWASFQSYVNRFDPSYDIRSSCGYNTSWISQGCVNVTTQQDFEALVPPSALQTIRKNCNQSLENNSPCALCTFSFSGVPHLGQSVGNLTGCTDYSSIYAAAFANDRGPSDPGTAKCLFSLEFSSTSSSAAKRRKLLFALVSVVSVLVFSLLALGFWAYLKLEKKVARDKDIGITEIGLVSGLDSMDQSTTLIRFTFDDIKKATKNFSRDNIVGRGGYGNVYKGLLPDGSEVAFKRFKNCSASGDASFTHEVEVIASVRHVNLVALRGYCSVTTRLEGYQRIIVCDMVKNGSLHDHLFGSNGVKLSWPIRQQIALGTARGLAYLHYGAQPAIIHRDIKASNILLDDKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGRKALQMNNDGQPSALTDWAWSLVRTGKALDVVEDGIPQPGSPQVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETDESVPSIPERPIPLVAGRLDIERSVSSSGSGQLSSPTGYQAYTLESDSQGTTSREERSSSSRILSTD* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00655 629 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 247 365 - -
Lapu7g00655 629 Pfam Protein kinase domain 287 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00655 629 SMART serkin_6 286 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00655 629 Pfam SPARK 27 158 IPR043891 -
Lapu7g00655 629 MobiDBLite consensus disorder prediction 585 629 - -
Lapu7g00655 629 SUPERFAMILY Protein kinase-like (PK-like) 268 573 IPR011009 -
Lapu7g00655 629 Gene3D Transferase(Phosphotransferase) domain 1 367 568 - -
Lapu7g00655 629 CDD STKc_IRAK 292 561 - -
Lapu7g00655 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Lapu7g00655 629 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 139 621 - -
Lapu7g00655 629 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Lapu7g00655 629 ProSiteProfiles Protein kinase domain profile. 286 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00655 629 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 367 568 - -
Lapu7g00655 629 Gene3D Phosphorylase Kinase; domain 1 259 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00655 Lapu-Chr7 7550659 7552795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00655 7 609 Receptor kinase-like Gene Family AT2G48010 62.829 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lapu7g00655 Pkinase 5.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00655 - - gmx:100800760 1003.82