Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00648 ATGGGGTCGAAACCGTGGCTCTACCCTGCTTCCACCTATCGAACTTTGGAAACTTTCTGGGACACCGATGAGGATGCGCCTGGTCCTCGCTGTGGGCACACCCTCACCGCAGTTGCTGCCACCAAAACTCAGGGTCCTCGCTTGATCCTGTTTGGCGGCGCCACCGCCATTGAAGGAGGATCTTCCTCCGCTCCCGGCATTAGGTTAGCCGGAGTCACAAACACTGTTCATTCCTACGACGTGCAAACTAGGAAATGGACTAGTATTAAACCTGCCGGAGAGCCGCCATCTCCTCGGGCTGCTCATGCAGCAGCTGCAGTTGGTACCATGGTTGTTTTTCAGGGTGGGATAGGACCAGCTGGGCATTCTACTGATGATCTCTATGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGGGTTGTTGTACAAGGGCAAGGACCTGGACCTCGCTATGGCCATGTAATGGACTTGGTTGCTCAGAGGTACCTAGTAACTGTCAGCGGAAATGATGGGAAAAGAGTGGTATCTGATGCTTGGGTTTTGGATACTGCTCAAAAACCTTATGTTTGGCAGAAGCTGAATCCAGAAGGTGACAGACCTTCTGCGAGAATGTATGCAACAGCTAGTGCCCGCTCAGATGGAATGTTTTTACTCTGTGGTGGAAGAGACTCTTCTGGAGCTCCACTAGCAGATGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACCCTTGCACCTGGAGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTTTTTGTTGGTGCACGATTACATGTAACAGGAGGTGTTCTTAGGGGTGGCCGGTCCGTGGAAGGTGAAGCATCCGTTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTAGACAGAAATGGGATTGTGTCCTCCTCACGCTCAAACAAAGGTCATGATTATGACCCTTCTTTGGAGCTTATGCGTCGTTGTCGTCATGCAGCCGCTGCTGTTAGTACTCATATATTTATCTACGGTGGGCTCAGAGGAGATATACTGCTAGATGATTTCTTAGTTGCTGAAAATTCACCATTGCAGCCTGACATTCATTCTCCTGAGAGAGCTTCATCTGTTACAAGTTCCAAACCAAGTCAATCTAACTTAAATTATAATGTAACAATGCAAAATATGGATGGTGGACCAGACATCATTTCATCTGGTGGATCTGGCATGGACAGAAATTCCTTGGAGAAACTGAGGGAAGCATCAGCTGCCGAAGCTGAGGCAGCGAGTGCTGTCTGGCAAGCTGTGCAGGCGATATCCAATAGTCCTGCTGAAGAAACATCTGTGTCAGATGACAACTCACAAGCTGCAGAAACTGTTTCAGATGGAAGTGACGCAGAGGGAGATGTTCGCCTTCATCCTAGAGCTGTTGTAGTTGCCAAGGAGGCTGTCGGTAACCTGGGTGGAATGGTGAGACAATTATCGCTTGATCAATTTGAAAATGAAAGCAGACGCATGATTCCCATAAATAATGATTTGCCATATCCTACGAAAAAGTTCACCAGGCAGAAATCTCCCCAGGGATTACATAAAAAGATAATTTCAACTTTGCTTAGGCCTCGCAACTGGAAAGCTCCTGGAAACAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAACTTTGCTATGCTGCAGAGCAAATATTTATGCATGAACCAACTGTTCTTCAGCTTAAAGCTCCAGTTAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCTACTGCAGGAGACATCACCTATATTGACTACCTGTTTTTGGGAGATTACGTTGATCGAGGACAGCACAGCTTGGAAACCATTACCTTGCTACTTGCTCTCAAGATCGAATATCCTGAGAATGTTCACTTGATACGAGGAAATCACGAAGCTGCTGACATAAATGCATTATTTGGTTTTCGTATTGAGTGCATTGAAAGAATGGGTGAAAATGACGGTATATGGGCATGGACACGATTCAATCAACTTTTTAACTATCTTCCATTAGCTGCTCTTATTGAAAAGAAAATTATATGTATGCATGGTGGCATTGGAAGGTCTATCAATTCAGTAGAACAAATAGAGAAGCTTGAAAGACCCATAACAATGGACGCAGGATCTATTATTTTAATGGACCTTCTATGGTCTGATCCCACAGAAAATGACAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGTCCAGGGCTTGTCACTTTTGGACCTGATCGTGTCACAGACTTTTGTAAGAGAAATAAATTACAGCTCATTATAAGGGCCCATGAGTGTGTCATGGATGGTTTTGAACGATTTGCCCAGGGACAATTAATCACCCTTTTTTCTGCTACTAACTATTGTGGAACTGCAAACAACGCGGGAGCAATACTGGTAGTTGGCAGGGGTTTGGTCGTGGTTCCAAAATTAATTCATCCTTTACCACCTCCCCTTCAGTCTCCTGAAACATCCCCTGAGCGTGGTATGGACGAGACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACTCGGGGTCGACCTCAGCCTGACCTTGACCGTGGTTCACTAGCATATATATGA 2646 0.4592 MGSKPWLYPASTYRTLETFWDTDEDAPGPRCGHTLTAVAATKTQGPRLILFGGATAIEGGSSSAPGIRLAGVTNTVHSYDVQTRKWTSIKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWVLDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASVAVLDTAAGVWLDRNGIVSSSRSNKGHDYDPSLELMRRCRHAAAAVSTHIFIYGGLRGDILLDDFLVAENSPLQPDIHSPERASSVTSSKPSQSNLNYNVTMQNMDGGPDIISSGGSGMDRNSLEKLREASAAEAEAASAVWQAVQAISNSPAEETSVSDDNSQAAETVSDGSDAEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPINNDLPYPTKKFTRQKSPQGLHKKIISTLLRPRNWKAPGNRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERGMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00648 881 MobiDBLite consensus disorder prediction 833 881 - -
Lapu7g00648 881 FunFam Serine/threonine-protein phosphatase 9 192 - -
Lapu7g00648 881 Pfam Serine-threonine protein phosphatase N-terminal domain 529 576 IPR031675 -
Lapu7g00648 881 SUPERFAMILY Kelch motif 70 357 IPR015915 GO:0005515
Lapu7g00648 881 SUPERFAMILY Metallo-dependent phosphatases 533 842 IPR029052 -
Lapu7g00648 881 MobiDBLite consensus disorder prediction 439 458 - -
Lapu7g00648 881 Pfam Galactose oxidase, central domain 29 96 - -
Lapu7g00648 881 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 8 881 - -
Lapu7g00648 881 MobiDBLite consensus disorder prediction 365 384 - -
Lapu7g00648 881 Gene3D - 5 193 IPR015915 GO:0005515
Lapu7g00648 881 Gene3D - 515 842 IPR029052 -
Lapu7g00648 881 FunFam Serine/threonine-protein phosphatase 515 854 - -
Lapu7g00648 881 Pfam Galactose oxidase, central domain 115 155 - -
Lapu7g00648 881 ProSitePatterns Serine/threonine specific protein phosphatases signature. 647 652 IPR006186 GO:0016787
Lapu7g00648 881 SMART pp2a_7 550 836 IPR006186 GO:0016787
Lapu7g00648 881 PRINTS Serine/threonine phosphatase family signature 714 741 IPR006186 GO:0016787
Lapu7g00648 881 PRINTS Serine/threonine phosphatase family signature 774 794 IPR006186 GO:0016787
Lapu7g00648 881 PRINTS Serine/threonine phosphatase family signature 796 812 IPR006186 GO:0016787
Lapu7g00648 881 PRINTS Serine/threonine phosphatase family signature 578 605 IPR006186 GO:0016787
Lapu7g00648 881 PRINTS Serine/threonine phosphatase family signature 613 640 IPR006186 GO:0016787
Lapu7g00648 881 PRINTS Serine/threonine phosphatase family signature 684 710 IPR006186 GO:0016787
Lapu7g00648 881 PRINTS Serine/threonine phosphatase family signature 646 670 IPR006186 GO:0016787
Lapu7g00648 881 Pfam Calcineurin-like phosphoesterase 578 785 IPR004843 GO:0016787
Lapu7g00648 881 PIRSF STPPP_BSU1 1 881 IPR012391 GO:0004721|GO:0009742
Lapu7g00648 881 Gene3D - 194 362 IPR015915 GO:0005515
Lapu7g00648 881 MobiDBLite consensus disorder prediction 361 384 - -
Lapu7g00648 881 MobiDBLite consensus disorder prediction 439 466 - -
Lapu7g00648 881 FunFam Serine/threonine-protein phosphatase 195 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00648 Lapu-Chr7 7473917 7485972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00648 579 777 Calmodulin-binding Proteins AT5G63870 32.609 7.23e-28 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00648 7 7473917 7485972 Lapu7g00648 7 7473917 7485972 ECH