Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00634 ATGAGTGGTTCTCCCAATCAAAAACAGAGAACGTGTGACTATTGTGGGGACTTCACAGCTCTCCTATATTGCAGAGCCGATTCTGCAAAGTTATGTTTCTTCTGTGACCGCAAAGTTCACTTCCCCAACCAGCTTTTCTCAAAGCACTCGCGCACTCAGCTCTGTGATGGGTGTGGCGATTCCCCTGCATCGGTGCTCTGTTATGCTGAGAACTCTGTTTTCTGCAACAACTGTGACTGCCAAAGCCAAAACAACCACTCGCTGTCTCGGGAACACCAACGGAGACCCCTTGAGGGATTCTCCGGGTGCCCTTCTGTGACTCAGATGTTAATGATTTTGGGTCTTACTGAAAAATCTCTGCTTTCAACTGAGGGAGAAAGTTCCTATGATGATGGCCTTTCCGATTTGCACGTGTGGAATGCTCCTTCTGCTTTTGGTCTTGAAGATTTGATTGCTTCCTCTTCTTCTCATAAGAATCATAAGGGTGCGTGCGGCAGACAGAAAGAAGAAATTGTGAGTCAGCTTCGTGAGCTAATAAAGTTGGAACCTGACTTGATTCATGGAGAAGTAGATGCTGAACGACAACTACAATTTGAAGATTTATCTACTGGTTTTGAACGTCACATAGAGGCTAATATGTTTCCTTCATATGAGGCAGGTGTGTTTTGTTGGCATGGAGAAAGCAGTGATCGTGCAAATCAAATTGTTCCTTCTGATACAACAATGAATGATTATAGCGAGCTACTTTCAGCTAAAGATCCAAGTTTTACCATCCCTGTAACTCACACCTATTGTAACAACCATTTTAAGGCTGAAAACTTATCTCCTACTCCTAAACCTACTCCTTACGAGTTAACAAGTCATGAAAGAGATTCAGCATTATTGCGTTACAGAGAGAAGAAGAAAACAAGAAGGTATGACAAGCACATCAGATACGAATCACGAAAAGTTCGGGCAGAAAGCAGGATGAGAATTAAGGGTCGGTTTGTGAAAGATGAAACACAAAAATAA 1011 0.4273 MSGSPNQKQRTCDYCGDFTALLYCRADSAKLCFFCDRKVHFPNQLFSKHSRTQLCDGCGDSPASVLCYAENSVFCNNCDCQSQNNHSLSREHQRRPLEGFSGCPSVTQMLMILGLTEKSLLSTEGESSYDDGLSDLHVWNAPSAFGLEDLIASSSSHKNHKGACGRQKEEIVSQLRELIKLEPDLIHGEVDAERQLQFEDLSTGFERHIEANMFPSYEAGVFCWHGESSDRANQIVPSDTTMNDYSELLSAKDPSFTIPVTHTYCNNHFKAENLSPTPKPTPYELTSHERDSALLRYREKKKTRRYDKHIRYESRKVRAESRMRIKGRFVKDETQK* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00634 336 SMART bboxneu5 7 54 IPR000315 GO:0008270
Lapu7g00634 336 SMART bboxneu5 55 97 IPR000315 GO:0008270
Lapu7g00634 336 Pfam CCT motif 290 332 IPR010402 GO:0005515
Lapu7g00634 336 ProSiteProfiles Zinc finger B-box type profile. 50 97 IPR000315 GO:0008270
Lapu7g00634 336 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 11 332 - -
Lapu7g00634 336 CDD Bbox1_BBX-like 12 54 - -
Lapu7g00634 336 ProSiteProfiles Zinc finger B-box type profile. 7 54 IPR000315 GO:0008270
Lapu7g00634 336 ProSiteProfiles CCT domain profile. 290 332 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00634 Lapu-Chr7 7310352 7314070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00634 6 305 C2C2-CO-like Transcription Factor Family AT2G47890 35.692 1.91e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lapu7g00634 CCT 2.8e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00634 - - vun:114189938 566.614