Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00618 ATGGTCGAAACCAGACGCAGCAGCTCCTCCTCTTCCAAGCGCTCTCTCTCTTCGCCTTCTCCCCCCAACAACACCAAAAGATCCAAGGTGTCCGAGGATTCCTCATCCACCACCGTGCCCTCCGTCGCACCGGTCAACGAATCTGGACCCCCCAATGAATCTGCCGAACCGGAGCTGCGGCCCTCTGATCTGCCCGATACGGCGTCGTTGAAGGCCGTCGATGGGTGTGATGCGATTTCGCCTGATAAATCTCCGTCTACACCCGTTGAGGGAGAGGCTTTGGTGTCCCCTCAGTGTCTAGGTGAAACAGCGGAGAAATCGAAGGGGGCTGGCGCAGCGGCGGCGACTGTATCCACGGGTGGTCGGTCGAAGAAACGCCCTACGAAGTTGAGCCCCAAGGTTGCGTGGGCGAAGCTCCTTTCACAGTGCTCTCAGAATCCTCATGTGCCCATAAGTGAGCTTATCTTCACTGTTGGTCAAGGTCGTAATTGTAATTTATGGCTTAAAGATCCCACTGTTGGTAATATTTTGTGCAAGTTGAGCCACATAGAGCGTGGAGGCTCGTCTGTTGCATTACTTGAAATCACAGGGGGCAAAGGTTCTATTCAAGTTAATGGCAAAACTCATCGAAGGAATGCCCGTTTGATTTTAAGTGGAGGAGATGAGGTGGTCTTTGGTTCTTCTGGCAAGCATGCTTATATCTTTCAACAGCTCACAAATAACAATATTAGTCCTGCTGGTATACCTTCTTCCGTGAGTATTTTAGAAGCCCAGAGTGCTCCTATAAATGGAACACAAGTTGAAGCTAGATCTGGTGACCCTTCTGCTGTTGCTGGAGCATCGATATTGGCCTCTTTATCTAATCTTCATAAAGACTTATCTCTCCTTTCGTCTCCTGCTAAAAATGGAAATAATGTGCAACAGAACACTGACATTTCGTCACTACCTTCTGGGAATGGGGATGATGTGCCAGACAGTGAAATGAAGGATGCCACCAATAAAGATGTACCATCATCTGGAGTTTTCTCTGCTGACAAATCTGTTCTAGCATCCTCGAATACTGTTAATGAAAATCCTAGCCTTGACACAACAGAAGTCGACACCACTGTGGATGCTGATGTTGGGAAGGTGACTGCTGCCACATATGAATTGAGGCCATTACTGCGCATGCTTGCTGGCTCATGTCCTGAACTTGATTTAAGTTGTGGCATTACCAAGATATTGGAAGAGCGAAGGGAATTAAGAGAACTCCTTAAAGATGTTGATACCCCAACAATATTGGCTTCAACCAGGCGGCAAGCATTCAAGGACAGTCTACAACAGAGAATTCTCAAATCTGAGAATATTGATGTCTCTTTTGAAACTTTCCCGTATTATCTAAGTGATACGACAAAGAACGTTTTGATTGCTTCTACATATATTCATTTGAAGTGCAATGGCTTTGGAAAATATGCTTCAGACCTCCCATCAGTGTCTCCACGAATATTGTTATCTGGTCCTGCAGGTTCGGAAATATATCAGGAGACTTTGTGCAAGGCACTTGCGAATCATTTTGGTGCCAGGCTACTGATTGTGGATTCTCTTTCATTGCCTGGTGGAGCACCTGCAAAGGAAGTAGAATCTGCTAAAGAGAGTTCCAGACCTGAAAGACCATCTGTGTTTGCTAAGAGAAGTTCGCAGACTGCCACATTACATCATAAGAAACCAGCTTCTAGTGTTGATGCTGAAATTATAGGTGGATCCACATTAAGTTCTCAGGCTATGCTGAAGCAAGAAGTTTCCACTGCATCATCAAAAGGCACTACTCTTAAAGAGGGTGATAGAGTAAAATTTGTTGGGAACTTTCCTTCTGCAGTATCGGCGCTACCAAATTATCCTTCTAGGGGACCAAGCTATGGCTCCCGGGGTAAAGTTCTTCTTGCTTTTGAAGATAACGGGTCTTCAAAAATTGGGGTTAGGTTTGATAAATCAATTCCAGATGGCAATGATCTTGGAGGCCTTTGTGAAGACGATAGAGGGTTCTTTTGTTCTGCGAATCATTTACTACGGGTAGATGGCTCTGGAGGGGATGATACAGACAAAGTTGCAATAAATGATATCTTTGAGGTTACCTCTAATCAGAGTAAAAGTGGTTCACTAGTGTTGTTCATTAAAGATATTGAGAAGGCAATGGTTGGGAACTATGATGTTTTGAAAAATAAATTTGAAAACTTGCCTCCTAATGTTGTGGTAATTGGCTCTCATACTATGCTTGACAATCGAAAGGAGAAGACCCAACCTGGTGGCCTTCTATTTACTAAGTTTGGGAGCAATCAGACAGCACTACTTGATCTTGCTTTCCCGGATAACTTTAGTAGACTACATGATAGGAGCAAAGAAACCCCTAAAGTAATGAAGCAACTTGGTCGGCTTTTCCCAAACAAAGTGACAATACAGCTGCCTCAGGATGAAGGTTTACTTTCTGATTGGAAGCAACAATTAGAACGTGATATTGAAACTATGAAAGCTCAGTCCAACATTGTCAGCGTTCGCACGGTTCTCAACAGGATTGGATTGGATTGCCCTGACCTTGAGACTCTTTGCATCAAAGATCAAACCCTAGCAACTGAAAGTGTGGAGAAGATCATTGGCTGGGCTATAAGTTACCATTTTATGCATTCATCTGAAGCTTCTACCAGAGATTCTAAGCTTGTGATATCTGCAGAAAGCATTAATTATGGGCTTAACATTCTACATGGCATTCAAAATGAAAACAAAAACTTGAAAAAATCGCTCAAGGATGTGGTTACTGAGAATGAGTTTGAGAAGAAGCTGCTAGCTGATGTTATTCCACCAACTGATATTGGGGTCACATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAAGGAATTGGTCATGCTTCCTCTGCAGAGGCCTGAATTATTTTGCAAAGGACAGCTGACAAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCCCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTAGCTACTGAAGCTGGAGCAAATTTTATTAACATTTCAATGTCTAGCATTACTTCAAAGTGGTTTGGTGAAGGAGAAAAGTACGTGAAAGCAGTTTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTCATTTTTGTTGACGAGGTTGATAGTATGTTAGGAAGACGTGAAAACCCCAGTGAGCACGAGGCCATGCGAAAAATGAAAAATGAGTTTATGGTTAATTGGGATGGTTTGCGTACTAAAGATAAAGAGCGTGTACTTGTTCTTGCTGCTACGAACAGGCCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCTCGAAGATTGATGGTTAATTTGCCAGATGCTCCAAACAGAGAAAAAATTCTCGGAGTCATTTTAGCAAAAGAAGATTTGGCACCTGATGTTGATTTTGAAGCAATGGCTACTATGACCGATGGGTATTCTGGGAGTGATCTAAAGAACCTGTGTGTCACAGCAGCTCACTGCCCAATACGAGAGATCTTAGAGAAGGAAAAGAAGGAGAAAAGCTTAGCATTATCTGAGAACAAACCTTTACCTGGATTGTGTGGTAGCTCCGACATTCGTCCTTTGAAGATGGAGGACTTTCGATATGCACATGAGCAGGTGTGTGCGAGCGTGTCATCAGAATCAACAAATATGAATGAACTACTCCAATGGAATGACCTCTACGGAGAAGGAGGATCAAGAAAAATGAGATCTCTGAGCTATTTCATGTAA 3768 0.4344 MVETRRSSSSSSKRSLSSPSPPNNTKRSKVSEDSSSTTVPSVAPVNESGPPNESAEPELRPSDLPDTASLKAVDGCDAISPDKSPSTPVEGEALVSPQCLGETAEKSKGAGAAAATVSTGGRSKKRPTKLSPKVAWAKLLSQCSQNPHVPISELIFTVGQGRNCNLWLKDPTVGNILCKLSHIERGGSSVALLEITGGKGSIQVNGKTHRRNARLILSGGDEVVFGSSGKHAYIFQQLTNNNISPAGIPSSVSILEAQSAPINGTQVEARSGDPSAVAGASILASLSNLHKDLSLLSSPAKNGNNVQQNTDISSLPSGNGDDVPDSEMKDATNKDVPSSGVFSADKSVLASSNTVNENPSLDTTEVDTTVDADVGKVTAATYELRPLLRMLAGSCPELDLSCGITKILEERRELRELLKDVDTPTILASTRRQAFKDSLQQRILKSENIDVSFETFPYYLSDTTKNVLIASTYIHLKCNGFGKYASDLPSVSPRILLSGPAGSEIYQETLCKALANHFGARLLIVDSLSLPGGAPAKEVESAKESSRPERPSVFAKRSSQTATLHHKKPASSVDAEIIGGSTLSSQAMLKQEVSTASSKGTTLKEGDRVKFVGNFPSAVSALPNYPSRGPSYGSRGKVLLAFEDNGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGGDDTDKVAINDIFEVTSNQSKSGSLVLFIKDIEKAMVGNYDVLKNKFENLPPNVVVIGSHTMLDNRKEKTQPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKVMKQLGRLFPNKVTIQLPQDEGLLSDWKQQLERDIETMKAQSNIVSVRTVLNRIGLDCPDLETLCIKDQTLATESVEKIIGWAISYHFMHSSEASTRDSKLVISAESINYGLNILHGIQNENKNLKKSLKDVVTENEFEKKLLADVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPSEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILGVILAKEDLAPDVDFEAMATMTDGYSGSDLKNLCVTAAHCPIREILEKEKKEKSLALSENKPLPGLCGSSDIRPLKMEDFRYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM* 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00618 1255 ProSitePatterns AAA-protein family signature. 1094 1113 IPR003960 GO:0005524|GO:0016887
Lapu7g00618 1255 CDD RecA-like_ATAD1 954 1120 - -
Lapu7g00618 1255 Gene3D - 135 244 - -
Lapu7g00618 1255 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 433 1254 - -
Lapu7g00618 1255 Pfam ATPase family associated with various cellular activities (AAA) 991 1120 IPR003959 GO:0005524|GO:0016887
Lapu7g00618 1255 MobiDBLite consensus disorder prediction 535 571 - -
Lapu7g00618 1255 Coils Coil 911 931 - -
Lapu7g00618 1255 MobiDBLite consensus disorder prediction 298 340 - -
Lapu7g00618 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 950 1229 IPR027417 -
Lapu7g00618 1255 MobiDBLite consensus disorder prediction 298 320 - -
Lapu7g00618 1255 MobiDBLite consensus disorder prediction 1 129 - -
Lapu7g00618 1255 Pfam AAA+ lid domain 1144 1180 IPR041569 -
Lapu7g00618 1255 MobiDBLite consensus disorder prediction 1 48 - -
Lapu7g00618 1255 MobiDBLite consensus disorder prediction 552 567 - -
Lapu7g00618 1255 SMART AAA_5 987 1124 IPR003593 GO:0016887
Lapu7g00618 1255 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 949 1124 - -
Lapu7g00618 1255 Gene3D - 949 1229 IPR027417 -
Lapu7g00618 1255 Gene3D - 1123 1217 - -
Lapu7g00618 1255 SUPERFAMILY SMAD/FHA domain 136 232 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00618 Lapu-Chr7 7052484 7064691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00618 986 1191 Calmodulin-binding Proteins AT3G56690 36.190 5.20e-31 130