Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00611 ATGGCAGCGTCCTCGTCAGATAAGCAAGTGGTGGTGATAGGAGTAGACGACAGCGAGCAGAGCACGTACGCCCTCAGATGGACCCTGGACCACTTCTTTCCGAGCCCAATCTTCAGTCTGGTTCTCGTCCACTCCAGGCCTGCGGCCAGTTCCACTGTGAGCCTTGGTGGGCCTAGTGCCGCTGAGATATTGCCTATTGTAGATTCCGATTTGCGAAAGATTGCCGTCACAGTCATCGATTCCGCTAAACAACTTTGCATCGACAAATCCGTTGATGACGTGACTGCCGAAATAGTGGAAGGTGATCCAAGAAATGTTCTTTGTGATGCTGTTGAAAGGTACCATGCTGCAGTTTTGGTTGTGGGTAGTCATGGTTATGGGCTTATAAGAAGGGCGGTTTTAGGTAGTGTAAGTGACTATTGTGCTCATCATGCTAACTGCACTGTGATGATCGTGAAGAAGCCAAAAACCAAACACTGA 480 0.4917 MAASSSDKQVVVIGVDDSEQSTYALRWTLDHFFPSPIFSLVLVHSRPAASSTVSLGGPSAAEILPIVDSDLRKIAVTVIDSAKQLCIDKSVDDVTAEIVEGDPRNVLCDAVERYHAAVLVVGSHGYGLIRRAVLGSVSDYCAHHANCTVMIVKKPKTKH* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00611 159 PRINTS Universal stress protein signature 8 26 IPR006015 -
Lapu7g00611 159 PRINTS Universal stress protein signature 113 125 IPR006015 -
Lapu7g00611 159 PRINTS Universal stress protein signature 131 153 IPR006015 -
Lapu7g00611 159 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 155 - -
Lapu7g00611 159 CDD USP_Like 11 152 - -
Lapu7g00611 159 Pfam Universal stress protein family 10 153 IPR006016 -
Lapu7g00611 159 Gene3D HUPs 2 159 IPR014729 -
Lapu7g00611 159 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 6 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00611 Lapu-Chr7 6987324 6989133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00611 21 154 Plant U-box Gene Family AT5G57035 27.703 6.45e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00611 - - gmx:100527357 266.159